Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4902 biogeco3 v1.0 208
AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GB98_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog3_v1.0_unigene4933 biogeco3 v1.0 724
AutoFact: putative ATP-dependent RNA helicase [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 17-like 0.0
Putative N-terminus
biog3_v1.0_unigene4946 biogeco3 v1.0 809
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: o-linked c transferase like protein 0.0
Internal
biog3_v1.0_unigene4955 biogeco3 v1.0 1517
AutoFact: DEAD box RNA helicase [Pisum sativum] gb|AAR97917.1| DEAD box RNA helicase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene4961 biogeco3 v1.0 957
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Eustoma grandiflorum (Bluebells) (Lisianthus russellianus). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4973 biogeco3 v1.0 480
AutoFact: pfam11916, Vac14_Fig4_bd, Vacuolar protein 14 C-terminal Fig4p binding 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein vac14 homolog 0.0
Internal
biog3_v1.0_unigene5082 biogeco3 v1.0 329
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q5D868_SPIOL 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dcl 0.0
Internal
biog3_v1.0_unigene5103 biogeco3 v1.0 1402
AutoFact: DNA-binding protein [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog3_v1.0_unigene5137 biogeco3 v1.0 424
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene5145 biogeco3 v1.0 1027
AutoFact: mitochondrial carrier protein-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: grave disease carrier 0.0
Putative C-terminus
biog3_v1.0_unigene5152 biogeco3 v1.0 624
AutoFact: putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] gb|EAY76689.1| hypothetical protein OsI_04643 [Oryza sativa Indica Group] gb|EAZ14353.1| hypothetical p 0.0
Blast2go: rna-binding region-containing 0.0
unknown
biog3_v1.0_unigene5153 biogeco3 v1.0 703
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL38267.1| unknown protein [Arabidopsis thaliana] gb|AAM47876.1| unknown protein [Arabidopsis thaliana] gb|AEC09632.1| Rossmann-fold NAD(P)-binding domain-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rossmann-fold nad -binding domain-containing protein 0.0
Internal
biog3_v1.0_unigene5209 biogeco3 v1.0 333
AutoFact: beta-1,3-galactosyltransferase 15 [Arabidopsis thaliana] sp|Q8L7F9.1|B3GTF_ARATH RecName: Full=Beta-1,3-galactosyltransferase 15; AltName: Full=Galactosyltransferase 1 gb|AAM91658.1| unknown protein [Arabidopsis thaliana] gb|ABR58858.1| beta-1,3-galactosy 0.0
FL-Next: Isoform 2 of Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 0.0
Blast2go: beta- -galactosyltransferase 15-like 0.0
Internal
biog3_v1.0_unigene5263 biogeco3 v1.0 313
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
C-terminus
biog3_v1.0_unigene5268 biogeco3 v1.0 726
AutoFact: pre-mRNA branch site protein p14 [Arabidopsis thaliana] ref|XP_002873554.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] sp|Q9FMP4.1|PM14_ARATH RecName: Full=Pre-mRNA branch site p14-like protein dbj|BAB10037.1| unnamed prot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna branch site p14-like protein 0.0
Complete
biog3_v1.0_unigene5305 biogeco3 v1.0 630
AutoFact: Saccharopine dehydrogenase [Arabidopsis thaliana] sp|Q8LGI2.2|SCPDH_ARATH RecName: Full=Probable mitochondrial saccharopine dehydrogenase At5g39410; Short=SDH gb|AAD09232.1| unknown [Arabidopsis thaliana] dbj|BAB11014.1| unnamed protein product [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable mitochondrial saccharopine dehydrogenase at5g39410-like 0.0
Internal
biog3_v1.0_unigene5358 biogeco3 v1.0 538
AutoFact: neurochondrin family protein [Arabidopsis thaliana] gb|AAX12879.1| At4g32050 [Arabidopsis thaliana] gb|AEE85998.1| neurochondrin family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: neurochondrin family protein 0.0
Internal
biog3_v1.0_unigene5430 biogeco3 v1.0 281
AutoFact: putative peroxisomal membrane carrier protein [Arabidopsis thaliana] 0.0
Blast2go: peroxisomal membrane protein 0.0
unknown
biog3_v1.0_unigene5443 biogeco3 v1.0 651
AutoFact: NmrA multi-domain protein 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene5463 biogeco3 v1.0 500
AutoFact: [TDBLU] COG5032 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transformation transcription domain-associated protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain