Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene3664 biogeco3 v1.0 532
AutoFact: SOUL heme-binding protein [Arabidopsis thaliana] gb|AAL38336.1| unknown protein [Arabidopsis thaliana] gb|AAN15391.1| unknown protein [Arabidopsis thaliana] gb|AED92799.1| SOUL heme-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: soul heme-binding protein 0.0
C-terminus
biog3_v1.0_unigene3700 biogeco3 v1.0 338
AutoFact: Pinoresinol-lariciresinol reductase n=1 Tax=Thuja plicata RepID=Q9LD14_THUPL 0.0
FL-Next: tr=Pinoresinol-lariciresinol reductase TH1; Tsuga heterophylla (Western hemlock) (Abies heterophylla). 0.0
Blast2go: isoflavone reductase homolog 0.0
Internal
biog3_v1.0_unigene3713 biogeco3 v1.0 848
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: niemann-pick c1 0.0
C-terminus
biog3_v1.0_unigene3771 biogeco3 v1.0 402
AutoFact: NAD(P)-binding Rossmann-fold-containing protein [Arabidopsis thaliana] sp|Q8H124.1|Y2446_ARATH RecName: Full=Uncharacterized protein At2g34460, chloroplastic; Flags: Precursor gb|AAN41284.1| unknown protein [Arabidopsis thaliana] gb|AEC08977.1| NAD(P)-bin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
N-terminus
biog3_v1.0_unigene3794 biogeco3 v1.0 456
AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO 0.0
FL-Next: sp=U-box domain-containing protein 30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u-box domain-containing protein 30-like 0.0
Internal
biog3_v1.0_unigene3813 biogeco3 v1.0 247
AutoFact: Lysyl-tRNA synthetase (Fragment) n=6 Tax=Magnoliophyta RepID=D7U9T8_VITVI 0.0
Blast2go: lysyl-trna synthetase 0.0
unknown
biog3_v1.0_unigene3855 biogeco3 v1.0 2287
AutoFact: ATP citrate lyase, putative; 3734-7120 n=13 Tax=Magnoliophyta RepID=Q9C522_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-citrate synthase beta chain protein 1-like 0.0
Complete
biog3_v1.0_unigene3935 biogeco3 v1.0 518
AutoFact: C2 domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4016 biogeco3 v1.0 1511
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin 0.0
Complete
biog3_v1.0_unigene4026 biogeco3 v1.0 395
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna-binding protein 5 10 0.0
Internal
biog3_v1.0_unigene4089 biogeco3 v1.0 296
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Cleome spinosa. 0.0
Blast2go: protein 6.72551e-29
Internal
biog3_v1.0_unigene4120 biogeco3 v1.0 1108
AutoFact: Ank_2 domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 0.0
N-terminus
biog3_v1.0_unigene4135 biogeco3 v1.0 349
AutoFact: Pre-mRNA-splicing factor SLU7-A [Arabidopsis thaliana] sp|Q9SHY8.2|SLU7A_ARATH RecName: Full=Pre-mRNA-splicing factor SLU7-A gb|AAO22622.1| putative step II splicing factor [Arabidopsis thaliana] gb|AEE34408.1| Pre-mRNA-splicing factor SLU7-A [Arabidopsis 0.0
FL-Next: sp=Pre-mRNA-splicing factor SLU7; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: pre-mrna-splicing factor slu7-a 0.0
C-terminus
biog3_v1.0_unigene4274 biogeco3 v1.0 554
AutoFact: Mitochondrial substrate carrier family protein [Arabidopsis thaliana] dbj|BAA97309.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gb|AAP40437.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gb|AAU90078.1| At5g64970 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial substrate carrier family protein 0.0
C-terminus
biog3_v1.0_unigene4279 biogeco3 v1.0 410
AutoFact: pfam01408, GFO_IDH_MocA, Oxidoreductase family, NAD-binding Rossmann fold 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized oxidoreductase at4g09670-like 0.0
C-terminus
biog3_v1.0_unigene4348 biogeco3 v1.0 457
AutoFact: centromeric protein E [Arabidopsis thaliana] gb|AAK64143.1| putative kinesin heavy chain [Arabidopsis thaliana] gb|AAD23684.2| putative kinesin heavy chain [Arabidopsis thaliana] gb|AAN12893.1| putative kinesin heavy chain [Arabidopsis thaliana] gb|AEC071 0.0
Blast2go: kinesin-related protein 0.0
unknown
biog3_v1.0_unigene4372 biogeco3 v1.0 599
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: o-linked c transferase like protein 0.0
C-terminus
biog3_v1.0_unigene4427 biogeco3 v1.0 391
AutoFact: Protein predicted to be involved in carbohydrate metabolism (ISS) [Ostreococcus tauri] emb|CAL57637.1| Protein predicted to be involved in carbohydrate metabolism (ISS) [Ostreococcus tauri] 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene4455 biogeco3 v1.0 830
AutoFact: lammer-type protein kinase [Sorghum bicolor] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase afc1 2.08065e-19
C-terminus
biog3_v1.0_unigene4456 biogeco3 v1.0 557
AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: brefeldin a-inhibited guanine nucleotide-exchange protein 1-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain