Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene25460 biogeco3 v1.0 330
• AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 1.0e-12
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: lysine-specific demethylase ref6-like 1.55374e-16
Internal
biog3_v1.0_unigene25513 biogeco3 v1.0 123
• AutoFact: Unassigned protein
• Blast2go: protein 1.73859e-15
unknown
biog3_v1.0_unigene25535 biogeco3 v1.0 286
• AutoFact: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform n=23 Tax=Magnoliophyta RepID=2AAB_ARATH 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: serine threonine protein phosphatase 2a regulatory subunit 0.0
Putative N-terminus
biog3_v1.0_unigene25640 biogeco3 v1.0 1627
• AutoFact: DEAD box RNA helicase [Pisum sativum] gb|AAR97917.1| DEAD box RNA helicase [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog3_v1.0_unigene25665 biogeco3 v1.0 1000
• AutoFact: NADPH-protochlorophyllide-oxidoreductase n=6 Tax=Pinaceae RepID=Q41202_PINMU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadph:protochlorophyllide oxidoreductase a 0.0
C-terminus
biog3_v1.0_unigene25698 biogeco3 v1.0 597
• AutoFact: Zeta carotene desaturase n=2 Tax=Daucus carota subsp. sativus RepID=Q2VER6_DAUCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zeta-carotene desaturase 0.0
Internal
biog3_v1.0_unigene25752 biogeco3 v1.0 466
• AutoFact: DUF659 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein loc100247282 0.0
Putative Complete
biog3_v1.0_unigene25762 biogeco3 v1.0 508
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene25786 biogeco3 v1.0 413
• AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: calreticulin precursor 0.0
C-terminus
biog3_v1.0_unigene25793 biogeco3 v1.0 202
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 26s proteasome regulatory subunit n2 0.0
Putative C-terminus
biog3_v1.0_unigene25863 biogeco3 v1.0 527
• AutoFact: Uridine cytidine kinase I, putative n=1 Tax=Ricinus communis RepID=B9SJ57_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
biog3_v1.0_unigene25908 biogeco3 v1.0 405
• AutoFact: 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis thaliana] gb|AAP21298.1| At3g15180 [Arabidopsis thaliana] dbj|BAE99435.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75628.1| 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis th 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 26s proteasome non-atpase regulatory subunit 5 0.0
Internal
biog3_v1.0_unigene25923 biogeco3 v1.0 296
• AutoFact: PREDICTED: zinc finger protein 546-like isoform 2 [Macaca mulatta] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene26012 biogeco3 v1.0 240
• AutoFact: DUF659 domain containing protein 0.0
• Blast2go: dna binding 0.0
Putative coding
biog3_v1.0_unigene26218 biogeco3 v1.0 131
• AutoFact: NADPH-protochlorophyllide-oxidoreductase n=6 Tax=Pinaceae RepID=Q41202_PINMU 0.0
• Blast2go: nadph:protochlorophyllide oxidoreductase a 0.0
unknown
biog3_v1.0_unigene26245 biogeco3 v1.0 165
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene26337 biogeco3 v1.0 277
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Coding
biog3_v1.0_unigene26370 biogeco3 v1.0 295
• AutoFact: 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis thaliana] gb|AAP21298.1| At3g15180 [Arabidopsis thaliana] dbj|BAE99435.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75628.1| 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis th 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 26s proteasome non-atpase regulatory subunit 5 0.0
Internal
biog3_v1.0_unigene26396 biogeco3 v1.0 279
• AutoFact: Phenylcoumaran benzylic ether reductase n=6 Tax=Pinaceae RepID=O81651_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phenylcoumaran benzylic ether reductase 0.0
Internal
biog3_v1.0_unigene26454 biogeco3 v1.0 1715
• AutoFact: DEAD box RNA helicase [Pisum sativum] gb|AAR97917.1| DEAD box RNA helicase [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain