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Assembly Name: biogeco3 v1.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1448 biogeco3 v1.0 461
AutoFact: Unassigned protein
FL-Next: sp=Pumilio homolog 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pumilio 23 0.0
Internal
biog3_v1.0_unigene1492 biogeco3 v1.0 300
AutoFact: F5K24.2 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPG3_ARATH 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrovirus-related polyproteins 1.34069e-13
Internal
biog3_v1.0_unigene1503 biogeco3 v1.0 411
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAM83244.1| AT3g03330/T21P5_25 [Arabidopsis thaliana] gb|AAN18119.1| At3g03330/T21P5_25 [Arabidopsis thaliana] gb|AEE73930.1| Rossmann-fold NAD(P)-binding domain-containing p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at3g03330 t21p5_25 0.0
Internal
biog3_v1.0_unigene1569 biogeco3 v1.0 373
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9N8L1_POPTR 0.0
Blast2go: histone-lysine n-methyltransferase ashh3-like 0.0
unknown
biog3_v1.0_unigene1596 biogeco3 v1.0 805
AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata transcription factor 5.90279e-16
Internal
biog3_v1.0_unigene1599 biogeco3 v1.0 343
AutoFact: Putative apyrase [Oryza sativa Japonica Group] gb|ABF95735.1| Nucleoside-triphosphatase, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apyrase 2 0.0
Putative C-terminus
biog3_v1.0_unigene1614 biogeco3 v1.0 344
AutoFact: [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: short-chain dehydrogenase reductase family protein 0.0
Putative N-terminus
biog3_v1.0_unigene1646 biogeco3 v1.0 1289
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
C-terminus
biog3_v1.0_unigene1671 biogeco3 v1.0 429
AutoFact: C-1-tetrahydrofolate synthase, cytoplasmic n=3 Tax=Andropogoneae RepID=B6SJR7_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene1681 biogeco3 v1.0 505
AutoFact: symplekin [Arabidopsis thaliana] dbj|BAF00598.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30851.1| symplekin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein loc100788861 0.0
Internal
biog3_v1.0_unigene1711 biogeco3 v1.0 1537
AutoFact: lipid-binding serum glycoprotein-like protein [Arabidopsis thaliana] gb|AAF40464.1|AC004809_22 ESTs gb|T76367 and gb|AA404955 come from this gene [Arabidopsis thaliana] gb|AAO42277.1| unknown protein [Arabidopsis thaliana] gb|AAO64007.1| unknown protein [ 0.0
FL-Next: sp=Putative BPI/LBP family protein At3g20270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: bpi lbp family protein at3g20270-like 0.0
Putative Complete
biog3_v1.0_unigene1728 biogeco3 v1.0 466
AutoFact: [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: short-chain dehydrogenase reductase family protein 0.0
Internal
biog3_v1.0_unigene1756 biogeco3 v1.0 296
AutoFact: mitochondrial FAD carrier [Cucumis melo subsp. melo] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene1780 biogeco3 v1.0 1937
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
Complete
biog3_v1.0_unigene1826 biogeco3 v1.0 553
AutoFact: Importin alpha-2 subunit, putative n=1 Tax=Ricinus communis RepID=B9SGQ4_RICCO 0.0
FL-Next: sp=Importin subunit alpha-2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: importin alpha-2 0.0
C-terminus
biog3_v1.0_unigene1827 biogeco3 v1.0 484
AutoFact: ankyrin repeat family protein [Arabidopsis thaliana] gb|AAF04911.1|AC011437_26 ankyrin-like protein [Arabidopsis thaliana] gb|AAM60915.1| ankyrin-like protein [Arabidopsis thaliana] gb|AAM97027.1| ankyrin-like protein [Arabidopsis thaliana] gb|AAN15520.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ankyrin repeat family protein 0.0
Internal
biog3_v1.0_unigene1837 biogeco3 v1.0 590
AutoFact: Mo25 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene1840 biogeco3 v1.0 634
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 0.0
C-terminus
biog3_v1.0_unigene1849 biogeco3 v1.0 273
AutoFact: BY-2 kinesin-like protein 5 n=1 Tax=Nicotiana tabacum RepID=Q9AVP5_TOBAC 1.0e-17
FL-Next: sp=Kinesin-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 6.14779e-20
Internal
biog3_v1.0_unigene1873 biogeco3 v1.0 457
AutoFact: [TDBLU] COG5032 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family 0.0
Blast2go: transformation transcription domain-associated protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain