Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene7115 biogeco3 v1.0 1014
• AutoFact: Nucleotide-sugar transporter family protein [Arabidopsis thaliana] ref|NP_001031992.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gb|AAM60900.1| CMP-sialic acid transporter-like protein [Arabidopsis thaliana] gb|AAO42302.1| putativ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable udp-sugar transporter protein slc35a5-like 0.0
C-terminus
biog3_v1.0_unigene7144 biogeco3 v1.0 541
• AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
• FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: serrate rna effector molecule-like 0.0
C-terminus
biog3_v1.0_unigene7155 biogeco3 v1.0 358
• AutoFact: TGA10 transcription factor n=1 Tax=Nicotiana tabacum RepID=Q52MZ2_TOBAC 0.0
• FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: transcription factor hbp-1b -like 0.0
C-terminus
biog3_v1.0_unigene7163 biogeco3 v1.0 428
• AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ31; Pinus taeda (Loblolly pine). 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene7251 biogeco3 v1.0 642
• AutoFact: DELLA protein n=3 Tax=Malus RepID=Q0HA72_MALDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: della protein 0.0
Putative N-terminus
biog3_v1.0_unigene7324 biogeco3 v1.0 823
• AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 3.99931e-42
• FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcription factor bhlh30 0.0
Putative N-terminus
biog3_v1.0_unigene7352 biogeco3 v1.0 430
• AutoFact: protein DP-E2F-like 1 [Arabidopsis thaliana] emb|CAD10633.1| transcription factor E2Fe [Arabidopsis thaliana] gb|AEE78374.1| protein DP-E2F-like 1 [Arabidopsis thaliana] 2.0e-34
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
• Blast2go: antagonist of e2f-dp complex 0.0
Internal
biog3_v1.0_unigene7368 biogeco3 v1.0 1105
• AutoFact: PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] dbj|BAD95354.1| receptor like protein [Arabidopsis thaliana] gb|AEE84563.1| PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ebs-bah-phd domain-containing protein 0.0
Putative Complete
biog3_v1.0_unigene7531 biogeco3 v1.0 408
• AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
• Blast2go: ap2 domain containing protein 2.25605e-23
Coding
biog3_v1.0_unigene7618 biogeco3 v1.0 470
• AutoFact: Unassigned protein
• FL-Next: sp=RAN GTPase-activating protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: nucleotide-binding oligomerization domain-containing protein 0.0
Internal
biog3_v1.0_unigene7700 biogeco3 v1.0 442
• AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2 0.0
N-terminus
biog3_v1.0_unigene7796 biogeco3 v1.0 504
• AutoFact: class II KNOX homeobox transcription factor [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox protein knotted-1-like 3-like 0.0
C-terminus
biog3_v1.0_unigene7876 biogeco3 v1.0 417
• AutoFact: AP2 domain-containing transcription factor 7 n=1 Tax=Glycine max RepID=C9WA65_SOYBN 2.0e-31
• Blast2go: dehydration responsive element binding protein 7.17662e-34
Putative coding
biog3_v1.0_unigene7936 biogeco3 v1.0 451
• AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKH0_9ASPA 9.99967e-42
• Blast2go: transcription factor hy5 0.0
Putative coding
biog3_v1.0_unigene7957 biogeco3 v1.0 645
• AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
• Blast2go: nuclear transcription factor y subunit c-2 0.0
Coding
biog3_v1.0_unigene8004 biogeco3 v1.0 303
• AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ocs element-binding 0.0
N-terminus
biog3_v1.0_unigene8087 biogeco3 v1.0 545
• AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 3.99931e-42
• Blast2go: transcription factor bhlh30 0.0
unknown
biog3_v1.0_unigene8125 biogeco3 v1.0 295
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
Internal
biog3_v1.0_unigene8223 biogeco3 v1.0 497
• AutoFact: ERM multi-domain protein 9.0e-06
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene8229 biogeco3 v1.0 347
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
• Blast2go: scarecrow-like protein 4-like 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain