Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene6206 biogeco3 v1.0 636
AutoFact: protein Dr1-like protein [Arabidopsis thaliana] gb|AED93121.1| protein Dr1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dr1-like protein 0.0
Putative Complete
biog3_v1.0_unigene6235 biogeco3 v1.0 558
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein 0.0
C-terminus
biog3_v1.0_unigene6293 biogeco3 v1.0 429
AutoFact: protein TWIN LOV 1 [Arabidopsis thaliana] dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein twin lov 1 0.0
Internal
biog3_v1.0_unigene6295 biogeco3 v1.0 458
AutoFact: BZIP transcription factor n=2 Tax=core eudicotyledons RepID=Q93YM7_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-inducible protein cprf2-like 0.0
Internal
biog3_v1.0_unigene6359 biogeco3 v1.0 511
AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
unknown
biog3_v1.0_unigene6362 biogeco3 v1.0 714
AutoFact: DUF547 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ternary complex factor mip1-like 0.0
Putative Complete
biog3_v1.0_unigene6365 biogeco3 v1.0 1763
AutoFact: zinc finger protein CONSTANS-LIKE 15 [Arabidopsis thaliana] sp|Q9C7E8.1|COL15_ARATH RecName: Full=Zinc finger protein CONSTANS-LIKE 15 gb|AAG51489.1|AC069471_20 CONSTANS family zinc finger protein, putative [Arabidopsis thaliana] gb|AAK59791.1| At1g28050/ 6.0e-39
FL-Next: sp=Zinc finger protein CONSTANS-LIKE 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger (b-box type) family protein 0.0
Complete
biog3_v1.0_unigene6514 biogeco3 v1.0 406
AutoFact: Ethylene receptor ETR1 n=2 Tax=core eudicotyledons RepID=B3FIA9_ACTDE 0.0
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: ethylene receptor 0.0
Internal
biog3_v1.0_unigene6617 biogeco3 v1.0 582
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chitin-inducible gibberellin-responsive protein 0.0
Internal
biog3_v1.0_unigene6633 biogeco3 v1.0 545
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like f-box protein 3 0.0
N-terminus
biog3_v1.0_unigene6649 biogeco3 v1.0 645
AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog3_v1.0_unigene6663 biogeco3 v1.0 1491
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog3_v1.0_unigene6677 biogeco3 v1.0 348
AutoFact: DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR78_CATRO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hdzip i protein 0.0
Internal
biog3_v1.0_unigene6755 biogeco3 v1.0 287
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
Blast2go: at4g04770 t4b21_16 0.0
unknown
biog3_v1.0_unigene6772 biogeco3 v1.0 455
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
Blast2go: myb family transcription factor 0.0
unknown
biog3_v1.0_unigene6786 biogeco3 v1.0 392
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
Blast2go: myb family transcription factor 0.0
unknown
biog3_v1.0_unigene6821 biogeco3 v1.0 495
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
Blast2go: nac domain ipr003441 0.0
unknown
biog3_v1.0_unigene6885 biogeco3 v1.0 408
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 0.0
Internal
biog3_v1.0_unigene6937 biogeco3 v1.0 276
AutoFact: DUF1421 multi-domain protein 9.0e-18
Blast2go: zinc finger protein 0.0
Putative coding
biog3_v1.0_unigene7109 biogeco3 v1.0 866
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain