Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4581 biogeco3 v1.0 198
AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
Blast2go: ureidoglycine aminohydrolase 0.0
unknown
biog3_v1.0_unigene4603 biogeco3 v1.0 375
AutoFact: Auxin-induced protein 2 n=2 Tax=Pinus RepID=Q7XYT5_PINTA 0.0
FL-Next: tr=Putative auxin induced transcription factor Aux/IAA; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin-responsive protein 0.0
Internal
biog3_v1.0_unigene4639 biogeco3 v1.0 892
AutoFact: SET domain protein SDG111 [Zea mays] gb|AAO32934.2| SET domain protein SDG111 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh1 0.0
C-terminus
biog3_v1.0_unigene4651 biogeco3 v1.0 492
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
Blast2go: fact complex subunit 0.0
Internal
biog3_v1.0_unigene4654 biogeco3 v1.0 427
AutoFact: Basic-leucine zipper transcription factor-like protein n=4 Tax=Arabidopsis RepID=B3H7M2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bzip transcription factor 0.0
Internal
biog3_v1.0_unigene4685 biogeco3 v1.0 458
AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Coding
biog3_v1.0_unigene4731 biogeco3 v1.0 411
AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene4752 biogeco3 v1.0 421
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
biog3_v1.0_unigene4794 biogeco3 v1.0 701
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
N-terminus
biog3_v1.0_unigene4795 biogeco3 v1.0 530
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW3_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding 0.0
C-terminus
biog3_v1.0_unigene4812 biogeco3 v1.0 995
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
Putative Complete
biog3_v1.0_unigene4842 biogeco3 v1.0 487
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 3.53968e-42
Internal
biog3_v1.0_unigene4843 biogeco3 v1.0 710
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
Internal
biog3_v1.0_unigene4860 biogeco3 v1.0 371
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene4934 biogeco3 v1.0 351
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SEE4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lil3 protein 0.0
Internal
biog3_v1.0_unigene4945 biogeco3 v1.0 372
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
biog3_v1.0_unigene4995 biogeco3 v1.0 348
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like f-box protein 3 0.0
Internal
biog3_v1.0_unigene5016 biogeco3 v1.0 211
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: b-block binding subunit of tfiiic 8.73608e-23
Internal
biog3_v1.0_unigene5105 biogeco3 v1.0 610
AutoFact: CCAAT-box binding factor HAP3 n=3 Tax=Selaginella moellendorffii RepID=D8RRZ5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 0.0
C-terminus
biog3_v1.0_unigene5169 biogeco3 v1.0 356
AutoFact: R2R3-MYB transcription factor MYB11 [Picea glauca] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain