|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene3642
|
biogeco3 v1.0
|
362
|
|
• AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind
|
0.0
|
|
• Blast2go: ssdna-binding transcriptional regulator
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene3683
|
biogeco3 v1.0
|
359
|
|
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor]
|
0.0
|
|
• FL-Next: sp=FACT complex subunit SSRP1; Catharanthus roseus (Madagascar periwinkle) (Vinca rosea).
|
0.0
|
|
• Blast2go: fact complex subunit ssrp1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3751
|
biogeco3 v1.0
|
838
|
|
• AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gras family transcription factor
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene3798
|
biogeco3 v1.0
|
365
|
|
• AutoFact: Ebs-bah-phd domain-containing protein n=7 Tax=Magnoliophyta RepID=B9IAJ0_POPTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ebs-bah-phd domain-containing protein
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene3814
|
biogeco3 v1.0
|
305
|
|
• AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA
|
0.0
|
|
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine).
|
0.0
|
|
• Blast2go: phytochrome
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3986
|
biogeco3 v1.0
|
795
|
|
• AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu
|
4.00001e-41
|
|
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene4011
|
biogeco3 v1.0
|
486
|
|
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4038
|
biogeco3 v1.0
|
1399
|
|
• AutoFact: pfam05920, Homeobox_KN, Homeobox KN domain
|
2.0e-16
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: homeobox protein knotted-1-like 3
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene4049
|
biogeco3 v1.0
|
232
|
|
• AutoFact: AG-motif binding protein-4 [Nicotiana tabacum]
|
8.0e-37
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gata binding protein 1
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene4056
|
biogeco3 v1.0
|
489
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: c2-h2 zinc finger protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4070
|
biogeco3 v1.0
|
592
|
|
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO
|
0.0
|
|
• FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: squamosa promoter-binding-like protein 14-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4078
|
biogeco3 v1.0
|
787
|
|
• AutoFact: Alcohol dehydrogenase transcription factor myb/SANT-like protein [Arabidopsis thaliana] gb|AAC27475.1| unknown protein [Arabidopsis thaliana] gb|AEC10459.1| Alcohol dehydrogenase transcription factor myb/SANT-like protein [Arabidopsis thaliana]
|
4.0e-22
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: alcohol dehydrogenase transcription factor myb sant-like protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene4179
|
biogeco3 v1.0
|
337
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: nf-x1-type zinc finger protein nfxl1-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4245
|
biogeco3 v1.0
|
439
|
|
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO
|
0.0
|
|
• Blast2go: scarecrow-like protein 1-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene4309
|
biogeco3 v1.0
|
246
|
|
• AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO
|
0.0
|
|
• FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene4448
|
biogeco3 v1.0
|
547
|
|
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: high mobility group family
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene4482
|
biogeco3 v1.0
|
524
|
|
• AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha
|
0.0
|
|
• FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: chromatin remodeling complex subunit
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4492
|
biogeco3 v1.0
|
401
|
|
• AutoFact: aprataxin [Arabidopsis thaliana] sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcrip
|
9.0e-10
|
|
• FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: transcription factor bhlh140-like
|
1.58562e-12
|
|
Internal
|
|
biog3_v1.0_unigene4552
|
biogeco3 v1.0
|
812
|
|
• AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 50s ribosomal protein l4
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene4573
|
biogeco3 v1.0
|
330
|
|
• AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ccch-type zinc finger protein
|
0.0
|
|
Internal
|
