Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2379 biogeco3 v1.0 322
• AutoFact: phaseolin G-box binding protein PG2 [Phaseolus vulgaris] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor 0.0
C-terminus
biog3_v1.0_unigene2435 biogeco3 v1.0 426
• AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gata transcription factor 22-like 0.0
C-terminus
biog3_v1.0_unigene2463 biogeco3 v1.0 356
• AutoFact: protein TWIN LOV 1 [Arabidopsis thaliana] dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana] 0.0
• Blast2go: protein twin lov 1 0.0
unknown
biog3_v1.0_unigene2521 biogeco3 v1.0 880
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
C-terminus
biog3_v1.0_unigene2522 biogeco3 v1.0 362
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
Internal
biog3_v1.0_unigene2720 biogeco3 v1.0 1431
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Putative N-terminus
biog3_v1.0_unigene2769 biogeco3 v1.0 1339
• AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ31; Pinus taeda (Loblolly pine). 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene2774 biogeco3 v1.0 1545
• AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccch-type zinc finger protein 0.0
C-terminus
biog3_v1.0_unigene2786 biogeco3 v1.0 362
• AutoFact: PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] dbj|BAD95354.1| receptor like protein [Arabidopsis thaliana] gb|AEE84563.1| PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: ebs-bah-phd domain-containing protein 0.0
unknown
biog3_v1.0_unigene2808 biogeco3 v1.0 1521
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
Complete
biog3_v1.0_unigene2862 biogeco3 v1.0 369
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene2942 biogeco3 v1.0 630
• AutoFact: Histidyl-tRNA synthetase n=3 Tax=Andropogoneae RepID=B6TS97_MAIZE 0.0
• FL-Next: sp=Histidyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene3035 biogeco3 v1.0 913
• AutoFact: Ethylene receptor ETR1 n=2 Tax=core eudicotyledons RepID=B3FIA9_ACTDE 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: ethylene receptor 0.0
Internal
biog3_v1.0_unigene3043 biogeco3 v1.0 374
• AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
• FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene3103 biogeco3 v1.0 2168
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Complete
biog3_v1.0_unigene3218 biogeco3 v1.0 416
• AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ap2 domain-containing transcription factor 0.0
C-terminus
biog3_v1.0_unigene3291 biogeco3 v1.0 453
• AutoFact: BZIP transcription factor n=2 Tax=core eudicotyledons RepID=Q93YM7_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: light-inducible protein cprf2-like 0.0
Internal
biog3_v1.0_unigene3419 biogeco3 v1.0 442
• AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor hbp-1a 0.0
C-terminus
biog3_v1.0_unigene3421 biogeco3 v1.0 685
• AutoFact: protein TWIN LOV 1 [Arabidopsis thaliana] dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein twin lov 1 0.0
N-terminus
biog3_v1.0_unigene3453 biogeco3 v1.0 719
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
• FL-Next: sp=Squamosa promoter-binding-like protein 15; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: squamosa promoter-binding-like protein 14-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain