Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene33 biogeco3 v1.0 743
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
C-terminus
biog3_v1.0_unigene115 biogeco3 v1.0 279
AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic leucine zipper transcription factor-like protein 0.0
Internal
biog3_v1.0_unigene197 biogeco3 v1.0 449
AutoFact: putative basic-leucine zipper transcription factor bZIP69 [Arabidopsis thaliana] gb|AAF80130.1|AC024174_12 Contains similarity to a b-Zip binding protein from Arabidopsis thaliana gb|Z86093 and contains a b-Zip transcription factor PF|00170 domain. ESTs g 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 21 0.0
C-terminus
biog3_v1.0_unigene571 biogeco3 v1.0 793
AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Putative N-terminus
biog3_v1.0_unigene874 biogeco3 v1.0 1312
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-binding transcription 0.0
Complete
biog3_v1.0_unigene890 biogeco3 v1.0 694
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
biog3_v1.0_unigene973 biogeco3 v1.0 1978
AutoFact: WRKY transcription factor PmWRKY119 (Fragment) n=4 Tax=Pinaceae RepID=E6Y3F1_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
C-terminus
biog3_v1.0_unigene1037 biogeco3 v1.0 747
AutoFact: ZF-HD homeobox protein [Arabidopsis thaliana] sp|Q9SB61.1|Y4466_ARATH RecName: Full=ZF-HD homeobox protein At4g24660; Short=AtHB-22 gb|AAL27510.1|AF439841_1 AT4g24660/F22K18_140 [Arabidopsis thaliana] emb|CAA22997.1| putative protein [Arabidopsis thaliana 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zf-hd homeobox protein at4g24660-like 1.56549e-30
N-terminus
biog3_v1.0_unigene1089 biogeco3 v1.0 866
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
Putative Complete
biog3_v1.0_unigene1160 biogeco3 v1.0 392
AutoFact: protein GT-2-like 1 [Arabidopsis thaliana] gb|AEE31573.1| protein GT-2-like 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Trihelix transcription factor GTL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene1211 biogeco3 v1.0 871
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor TGA5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor hbp-1b 0.0
N-terminus
biog3_v1.0_unigene1649 biogeco3 v1.0 883
AutoFact: WRKY transcription factor PmWRKY108 (Fragment) n=2 Tax=Pinus monticola RepID=E6Y3E0_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
Internal
biog3_v1.0_unigene1803 biogeco3 v1.0 215
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein athb-13 0.0
Internal
biog3_v1.0_unigene1847 biogeco3 v1.0 363
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RMJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein 0.0
Internal
biog3_v1.0_unigene1881 biogeco3 v1.0 555
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homeobox protein 0.0
Internal
biog3_v1.0_unigene1948 biogeco3 v1.0 1127
AutoFact: [K] COG1813 Predicted transcription factor, homolog of eukaryotic MBF1 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endothelial differentiation-related factor 1 0.0
Complete
biog3_v1.0_unigene1957 biogeco3 v1.0 738
AutoFact: putative Fip1 motif containing protein [Oryza sativa Japonica Group] gb|ABF98630.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] gb|ABF98631.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp binding 0.0
Internal
biog3_v1.0_unigene2200 biogeco3 v1.0 216
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
Blast2go: bzip domain class transcription factor 0.0
unknown
biog3_v1.0_unigene2245 biogeco3 v1.0 468
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RMJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein 0.0
Internal
biog3_v1.0_unigene2361 biogeco3 v1.0 538
AutoFact: Class III homeodomain leucine zipper protein n=6 Tax=Spermatophyta RepID=E7DX26_PICGL 0.0
FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain