Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene15754 biogeco3 v1.0 275
AutoFact: DNA-binding WRKY domain-containing protein [Musa acuminata] 5.0e-37
Blast2go: probable wrky transcription factor 28-like 1.96182e-44
unknown
biog3_v1.0_unigene15785 biogeco3 v1.0 350
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
Internal
biog3_v1.0_unigene15888 biogeco3 v1.0 192
AutoFact: protein Dr1-like protein [Arabidopsis thaliana] gb|AED93121.1| protein Dr1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dr1-like protein 0.0
N-terminus
biog3_v1.0_unigene16343 biogeco3 v1.0 345
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit b-3 0.0
Putative C-terminus
biog3_v1.0_unigene16554 biogeco3 v1.0 286
AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ9_MALDO 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor hbp-1a 6.27163e-13
N-terminus
biog3_v1.0_unigene16644 biogeco3 v1.0 300
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
Blast2go: homeobox-leucine zipper family protein 0.0
unknown
biog3_v1.0_unigene16861 biogeco3 v1.0 200
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
Blast2go: bzip domain class transcription factor 0.0
unknown
biog3_v1.0_unigene17052 biogeco3 v1.0 179
AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
Blast2go: ocs element-binding 0.0
unknown
biog3_v1.0_unigene17210 biogeco3 v1.0 360
AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky dna-binding protein 21 0.0
C-terminus
biog3_v1.0_unigene17593 biogeco3 v1.0 349
AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene17748 biogeco3 v1.0 185
AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky dna-binding protein 21 0.0
Internal
biog3_v1.0_unigene18022 biogeco3 v1.0 277
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
unknown
biog3_v1.0_unigene18078 biogeco3 v1.0 167
AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene19000 biogeco3 v1.0 160
AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
Blast2go: wrky transcription factor 0.0
unknown
biog3_v1.0_unigene19570 biogeco3 v1.0 169
AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
Blast2go: mads-box transcription factor 3 0.0
unknown
biog3_v1.0_unigene19639 biogeco3 v1.0 135
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
Blast2go: homeobox-leucine zipper family protein 0.0
unknown
biog3_v1.0_unigene19669 biogeco3 v1.0 104
AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky dna-binding protein 21 0.0
Internal
biog3_v1.0_unigene19912 biogeco3 v1.0 128
AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box transcription factor 3 0.0
Internal
biog3_v1.0_unigene20339 biogeco3 v1.0 274
AutoFact: translin-like protein [Arabidopsis thaliana] gb|AAL47394.1| translin-like protein [Arabidopsis thaliana] gb|AAD31587.2| translin-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translin-like protein 0.0
Internal
biog3_v1.0_unigene21176 biogeco3 v1.0 443
AutoFact: Short-root n=1 Tax=Pinus radiata RepID=B4XI11_PINRA 0.0
FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain