Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene11079 biogeco3 v1.0 1058
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor hbp-1a 0.0
Putative Complete
biog3_v1.0_unigene11083 biogeco3 v1.0 473
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
C-terminus
biog3_v1.0_unigene11306 biogeco3 v1.0 1050
AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene11956 biogeco3 v1.0 252
AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-17
Blast2go: bzip transcription factor 0.0
unknown
biog3_v1.0_unigene11960 biogeco3 v1.0 314
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
Internal
biog3_v1.0_unigene12130 biogeco3 v1.0 1062
AutoFact: MADS-box protein n=7 Tax=Pinaceae RepID=A0S6W4_9CONI 0.0
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Blast2go: mads-box transcription factor 0.0
Complete
biog3_v1.0_unigene12193 biogeco3 v1.0 499
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip domain class transcription factor 0.0
Putative C-terminus
biog3_v1.0_unigene13192 biogeco3 v1.0 552
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Internal
biog3_v1.0_unigene13525 biogeco3 v1.0 412
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
Blast2go: transcription factor hbp-1a 0.0
unknown
biog3_v1.0_unigene13610 biogeco3 v1.0 275
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Internal
biog3_v1.0_unigene13736 biogeco3 v1.0 352
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
Putative coding
biog3_v1.0_unigene13799 biogeco3 v1.0 407
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable WRKY transcription factor 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
Putative N-terminus
biog3_v1.0_unigene14036 biogeco3 v1.0 627
AutoFact: Homeobox transcription factor KN3 n=296 Tax=Pinaceae RepID=Q5SC63_PINTA 0.0
FL-Next: tr=Homeobox transcription factor KN3; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeobox transcription factor kn3 0.0
Internal
biog3_v1.0_unigene14728 biogeco3 v1.0 359
AutoFact: putative Fip1 motif containing protein [Oryza sativa Japonica Group] gb|ABF98630.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] gb|ABF98631.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] 4.99983e-42
Blast2go: atp binding 0.0
Coding
biog3_v1.0_unigene14975 biogeco3 v1.0 302
AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
Internal
biog3_v1.0_unigene15205 biogeco3 v1.0 401
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
biog3_v1.0_unigene15318 biogeco3 v1.0 332
AutoFact: type II homeodomain-leucine zipper protein [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene15319 biogeco3 v1.0 324
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
biog3_v1.0_unigene15434 biogeco3 v1.0 265
AutoFact: pfam05920, Homeobox_KN, Homeobox KN domain 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox protein knotted-1-like 3 0.0
Internal
biog3_v1.0_unigene15450 biogeco3 v1.0 244
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain