Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2435 biogeco3 v1.0 426
AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata transcription factor 22-like 0.0
C-terminus
biog3_v1.0_unigene2720 biogeco3 v1.0 1431
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Putative N-terminus
biog3_v1.0_unigene2769 biogeco3 v1.0 1339
AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
FL-Next: tr=Class III HD-Zip protein HDZ31; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene3043 biogeco3 v1.0 374
AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene3226 biogeco3 v1.0 885
AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
Internal
biog3_v1.0_unigene3291 biogeco3 v1.0 453
AutoFact: BZIP transcription factor n=2 Tax=core eudicotyledons RepID=Q93YM7_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-inducible protein cprf2-like 0.0
Internal
biog3_v1.0_unigene3419 biogeco3 v1.0 442
AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor hbp-1a 0.0
C-terminus
biog3_v1.0_unigene3986 biogeco3 v1.0 795
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene4038 biogeco3 v1.0 1399
AutoFact: pfam05920, Homeobox_KN, Homeobox KN domain 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox protein knotted-1-like 3 0.0
C-terminus
biog3_v1.0_unigene4049 biogeco3 v1.0 232
AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata binding protein 1 0.0
Putative N-terminus
biog3_v1.0_unigene4654 biogeco3 v1.0 427
AutoFact: Basic-leucine zipper transcription factor-like protein n=4 Tax=Arabidopsis RepID=B3H7M2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bzip transcription factor 0.0
Internal
biog3_v1.0_unigene4685 biogeco3 v1.0 458
AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Coding
biog3_v1.0_unigene4731 biogeco3 v1.0 411
AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene4779 biogeco3 v1.0 1675
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
N-terminus
biog3_v1.0_unigene4794 biogeco3 v1.0 701
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
N-terminus
biog3_v1.0_unigene4860 biogeco3 v1.0 371
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene4994 biogeco3 v1.0 323
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
Coding
biog3_v1.0_unigene5016 biogeco3 v1.0 211
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: b-block binding subunit of tfiiic 8.73608e-23
Internal
biog3_v1.0_unigene5105 biogeco3 v1.0 610
AutoFact: CCAAT-box binding factor HAP3 n=3 Tax=Selaginella moellendorffii RepID=D8RRZ5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 0.0
C-terminus
biog3_v1.0_unigene5207 biogeco3 v1.0 1110
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain