Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene33 biogeco3 v1.0 743
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
C-terminus
biog3_v1.0_unigene53 biogeco3 v1.0 1053
AutoFact: TATA-box binding protein [Phaseolus vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tata-binding protein 0.0
Complete
biog3_v1.0_unigene115 biogeco3 v1.0 279
AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic leucine zipper transcription factor-like protein 0.0
Internal
biog3_v1.0_unigene162 biogeco3 v1.0 178
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain containing protein 2.25605e-23
Internal
biog3_v1.0_unigene170 biogeco3 v1.0 475
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like f-box protein 3 0.0
C-terminus
biog3_v1.0_unigene197 biogeco3 v1.0 449
AutoFact: putative basic-leucine zipper transcription factor bZIP69 [Arabidopsis thaliana] gb|AAF80130.1|AC024174_12 Contains similarity to a b-Zip binding protein from Arabidopsis thaliana gb|Z86093 and contains a b-Zip transcription factor PF|00170 domain. ESTs g 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 21 0.0
C-terminus
biog3_v1.0_unigene237 biogeco3 v1.0 777
AutoFact: Inducer of CBF expression 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZF3_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor ice1 0.0
N-terminus
biog3_v1.0_unigene390 biogeco3 v1.0 709
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RZ39_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Putative C-terminus
biog3_v1.0_unigene492 biogeco3 v1.0 1339
AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein At4g17050; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ureidoglycine aminohydrolase 0.0
Complete
biog3_v1.0_unigene571 biogeco3 v1.0 793
AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Putative N-terminus
biog3_v1.0_unigene612 biogeco3 v1.0 337
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Internal
biog3_v1.0_unigene707 biogeco3 v1.0 677
AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
Blast2go: transcription factor tcp4 4.49701e-39
Putative coding
biog3_v1.0_unigene890 biogeco3 v1.0 694
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
biog3_v1.0_unigene973 biogeco3 v1.0 1978
AutoFact: WRKY transcription factor PmWRKY119 (Fragment) n=4 Tax=Pinaceae RepID=E6Y3F1_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
C-terminus
biog3_v1.0_unigene1001 biogeco3 v1.0 441
AutoFact: Ethylene response factor 1 n=1 Tax=Cucumis sativus RepID=Q5S004_CUCSA 4.0e-14
Blast2go: ethylene-responsive element binding factor-like protein 1.6707e-15
unknown
biog3_v1.0_unigene1037 biogeco3 v1.0 747
AutoFact: ZF-HD homeobox protein [Arabidopsis thaliana] sp|Q9SB61.1|Y4466_ARATH RecName: Full=ZF-HD homeobox protein At4g24660; Short=AtHB-22 gb|AAL27510.1|AF439841_1 AT4g24660/F22K18_140 [Arabidopsis thaliana] emb|CAA22997.1| putative protein [Arabidopsis thaliana 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zf-hd homeobox protein at4g24660-like 1.56549e-30
N-terminus
biog3_v1.0_unigene1089 biogeco3 v1.0 866
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
Putative Complete
biog3_v1.0_unigene1123 biogeco3 v1.0 353
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
Internal
biog3_v1.0_unigene1135 biogeco3 v1.0 365
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Putative C-terminus
biog3_v1.0_unigene1148 biogeco3 v1.0 1523
AutoFact: casein kinase 2, alpha polypeptide [Arabidopsis thaliana] gb|AAC17823.1| putative casein kinase II catalytic (alpha) subunit [Arabidopsis thaliana] gb|AAL32709.1| putative casein kinase II catalytic (alpha) subunit [Arabidopsis thaliana] gb|AAM10040.1| pu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase ii alpha subunit 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain