Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: tRNA binding

Term: GO:0000049  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene730 biogeco3 v1.0 367
• AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
• FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; subsp. trichocarpa). 0.0
• Blast2go: alanyl-trna synthetase 0.0
Internal
biog3_v1.0_unigene1804 biogeco3 v1.0 723
• AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
Internal
biog3_v1.0_unigene1934 biogeco3 v1.0 319
• AutoFact: 30S ribosomal protein S10, putative n=1 Tax=Ricinus communis RepID=B9S9Q5_RICCO 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s10 0.0
C-terminus
biog3_v1.0_unigene2494 biogeco3 v1.0 340
• AutoFact: cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana] sp|O64862.2|CTU1_ARATH RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName: Full=Cytoplasmic tRNA adenylyltransferase 1 dbj|BAC41934.1| unknown protein [Arabidopsis thaliana] gb|AAP 0.0
• FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: cytoplasmic trna 2-thiolation protein 1 0.0
N-terminus
biog3_v1.0_unigene6051 biogeco3 v1.0 363
• AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methionyl-trna synthetase 0.0
Internal
biog3_v1.0_unigene6127 biogeco3 v1.0 672
• AutoFact: Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] emb|CAB75817.1| putative protein [Arabidopsis thaliana] gb|AAK76594.1| unknown protein [Arabidopsis thaliana] gb|AAM44914.1| unknown protein [Arabidopsis thaliana] gb|AAM63861.1| unknown [A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene6893 biogeco3 v1.0 339
• AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
C-terminus
biog3_v1.0_unigene7323 biogeco3 v1.0 471
• AutoFact: 30S ribosomal protein S10, putative n=1 Tax=Ricinus communis RepID=B9S9Q5_RICCO 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s10 0.0
N-terminus
biog3_v1.0_unigene7930 biogeco3 v1.0 332
• AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
• Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
unknown
biog3_v1.0_unigene9943 biogeco3 v1.0 528
• AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methionyl-trna synthetase 0.0
Internal
biog3_v1.0_unigene10752 biogeco3 v1.0 865
• AutoFact: PREDICTED: phenylalanyl-tRNA synthetase beta chain [Monodelphis domestica] 0.0
• FL-Next: sp=Probable phenylalanyl-tRNA synthetase beta chain; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene11700 biogeco3 v1.0 934
• AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methionyl-trna synthetase 0.0
Internal
biog3_v1.0_unigene13257 biogeco3 v1.0 259
• AutoFact: Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] emb|CAB75817.1| putative protein [Arabidopsis thaliana] gb|AAK76594.1| unknown protein [Arabidopsis thaliana] gb|AAM44914.1| unknown protein [Arabidopsis thaliana] gb|AAM63861.1| unknown [A 0.0
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene14412 biogeco3 v1.0 235
• AutoFact: PREDICTED: phenylalanyl-tRNA synthetase beta chain [Monodelphis domestica] 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene21052 biogeco3 v1.0 284
• AutoFact: cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana] sp|O64862.2|CTU1_ARATH RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName: Full=Cytoplasmic tRNA adenylyltransferase 1 dbj|BAC41934.1| unknown protein [Arabidopsis thaliana] gb|AAP 0.0
• Blast2go: cytoplasmic trna 2-thiolation protein 1 0.0
unknown
biog3_v1.0_unigene22484 biogeco3 v1.0 247
• AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
• Blast2go: methionyl-trna synthetase 0.0
unknown
biog3_v1.0_unigene26152 biogeco3 v1.0 84
• AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
• Blast2go: methionyl-trna synthetase 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain