Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: cytosol

Term: GO:0005829  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene58 biogeco3 v1.0 378
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana 5.0e-26
Blast2go: transducin family protein 1.29124e-37
unknown
biog3_v1.0_unigene59 biogeco3 v1.0 815
AutoFact: xylulose kinase-2 [Arabidopsis thaliana] gb|AAK92778.1| putative xylulose kinase [Arabidopsis thaliana] gb|AAN13165.1| putative xylulose kinase [Arabidopsis thaliana] gb|AED95841.1| xylulose kinase-2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: xylulose kinase 0.0
Internal
biog3_v1.0_unigene76 biogeco3 v1.0 1319
AutoFact: human Rev interacting-like protein-like [Oryza sativa Japonica Group] dbj|BAD25012.1| human Rev interacting-like protein-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: arf-gap domain and fg repeats-containing protein 0.0
C-terminus
biog3_v1.0_unigene86 biogeco3 v1.0 866
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Internal
biog3_v1.0_unigene143 biogeco3 v1.0 799
AutoFact: Protein binding protein n=3 Tax=Andropogoneae RepID=B6SPB5_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
Putative C-terminus
biog3_v1.0_unigene155 biogeco3 v1.0 317
AutoFact: RabGAP/TBC domain-containing protein-like [Oryza sativa Japonica Group] 5.0e-39
FL-Next: tr=Run and tbc1 domain containing 3, plant, putative; Ricinus communis (Castor bean). 0.0
Blast2go: run and tbc1 domain containing 0.0
Internal
biog3_v1.0_unigene198 biogeco3 v1.0 563
AutoFact: pfam04091, Sec15, Exocyst complex subunit Sec15-like 0.0
FL-Next: sp=Probable exocyst complex component 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene202 biogeco3 v1.0 706
AutoFact: pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1) 1.0e-25
FL-Next: tr=Fructose-2,6-bisphosphatase; Zea mays (Maize). 0.0
Blast2go: fructose- -bisphosphatase 0.0
C-terminus
biog3_v1.0_unigene284 biogeco3 v1.0 489
AutoFact: SNARE-interacting protein KEULE n=2 Tax=Arabidopsis RepID=KEULE_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snare-interacting protein keule 0.0
Putative N-terminus
biog3_v1.0_unigene306 biogeco3 v1.0 960
AutoFact: Golgi SNARE 12 protein n=4 Tax=Arabidopsis RepID=GOS12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: golgi snare 12 protein 0.0
Complete
biog3_v1.0_unigene320 biogeco3 v1.0 243
AutoFact: Red chlorophyll catabolite reductase (Fragment) n=2 Tax=Pinaceae RepID=Q1ELT4_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: red chlorophyll catabolite reductase 0.0
C-terminus
biog3_v1.0_unigene382 biogeco3 v1.0 545
AutoFact: Probable pyridoxal biosynthesis protein PDX1 n=2 Tax=Spermatophyta RepID=PDX1_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene447 biogeco3 v1.0 656
AutoFact: Heat shock protein 90-1 n=9 Tax=rosids RepID=HS901_ARATH 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: heat shock protein 81-1 0.0
Internal
biog3_v1.0_unigene455 biogeco3 v1.0 714
AutoFact: Arf gtpase-activating protein, putative n=1 Tax=Ricinus communis RepID=B9SP31_RICCO 0.0
Blast2go: adp-ribosylation factor gtpase-activating protein agd6 0.0
Coding
biog3_v1.0_unigene502 biogeco3 v1.0 490
AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich receptor-like protein kinase bam1 0.0
C-terminus
biog3_v1.0_unigene505 biogeco3 v1.0 497
AutoFact: BTB/POZ; MATH [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz protein 0.0
C-terminus
biog3_v1.0_unigene539 biogeco3 v1.0 508
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Internal
biog3_v1.0_unigene565 biogeco3 v1.0 1492
AutoFact: ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_001031289.1| ACT domain-containing protein 3 [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: act domain-containing protein 3 0.0
Complete
biog3_v1.0_unigene568 biogeco3 v1.0 332
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Internal
biog3_v1.0_unigene662 biogeco3 v1.0 483
AutoFact: Putative arogenate dehydratase n=1 Tax=Capsicum annuum RepID=B5LAT0_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arogenate dehydratase prephenate dehydratase chloroplastic-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain