Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene13 biogeco3 v1.0 455
AutoFact: Photosystem I subunit H n=1 Tax=Lycoris radiata RepID=D1MFT3_LYCRD 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: h chain improved model of plant photosystem i 0.0
N-terminus
biog3_v1.0_unigene56 biogeco3 v1.0 1000
AutoFact: Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I n=5 Tax=Pinaceae RepID=Q07489_PINSY 0.0
FL-Next: tr=Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I; Pinus sylvestris (Scots pine). 0.0
Blast2go: chlorophyll a-b binding protein 4 precursor homolog 0.0
Complete
biog3_v1.0_unigene100 biogeco3 v1.0 256
AutoFact: 30S ribosomal protein S6 alpha [Arabidopsis thaliana] sp|Q8VY91.1|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags: Precursor gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana] gb|AAM47900.1| plastid r 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene125 biogeco3 v1.0 642
AutoFact: PsbP domain containing protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: psbp domain-containing protein chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene213 biogeco3 v1.0 768
AutoFact: Rieske (2Fe-2S) domain-containing protein [Arabidopsis thaliana] gb|AAG51832.1|AC016163_21 unknown protein; 39989-38742 [Arabidopsis thaliana] gb|AAM13030.1| unknown protein [Arabidopsis thaliana] gb|AAM64783.1| unknown [Arabidopsis thaliana] gb|AAM91334. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rieske domain containing expressed 0.0
C-terminus
biog3_v1.0_unigene261 biogeco3 v1.0 363
AutoFact: thylakoid rhodanese-like protein [Arabidopsis thaliana] sp|Q9M158.2|Y4105_ARATH RecName: Full=Uncharacterized protein At4g01050, chloroplastic; Flags: Precursor gb|AAL09804.1| AT4g01050/F2N1_31 [Arabidopsis thaliana] gb|AAL15331.1| AT4g01050/F2N1_31 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01050 f2n1_31 0.0
Putative C-terminus
biog3_v1.0_unigene316 biogeco3 v1.0 455
AutoFact: DnaJ/Hsp40 cysteine-rich domain-containing protein [Arabidopsis thaliana] dbj|BAC42509.1| unknown protein [Arabidopsis thaliana] gb|AAO00738.1| unknown protein [Arabidopsis thaliana] gb|AAP21355.1| At1g75690 [Arabidopsis thaliana] gb|AEE35746.1| DnaJ/Hsp4 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene515 biogeco3 v1.0 851
AutoFact: Inner membrane protein ALBINO3, chloroplastic n=4 Tax=Arabidopsis RepID=ALB3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inner membrane protein albino3 0.0
Putative N-terminus
biog3_v1.0_unigene603 biogeco3 v1.0 454
AutoFact: Thylakoid lumenal 17.4 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJT2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thylakoid lumenal protein 0.0
C-terminus
biog3_v1.0_unigene710 biogeco3 v1.0 294
AutoFact: chlorophyll synthase [Arabidopsis thaliana] sp|Q38833.1|CHLG_ARATH RecName: Full=Chlorophyll synthase, chloroplastic; AltName: Full=Polyprenyl transferase; AltName: Full=Protein G4; Short=AtG4; Flags: Precursor gb|AAA96740.1| putative chlorophyll syntheta 0.0
Blast2go: chlorophyll synthase 0.0
unknown
biog3_v1.0_unigene801 biogeco3 v1.0 749
AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q8LDV3.2|Y4320_ARATH RecName: Full=Uncharacterized protein At4g13200, chloroplastic; Flags: Precursor emb|CAB41930.1| putative protein [Arabidopsis thaliana] emb|CAB78362.1| putative protein [Arabidopsis t 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene905 biogeco3 v1.0 688
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene1021 biogeco3 v1.0 1558
AutoFact: Os07g0143000 protein n=4 Tax=Oryza sativa RepID=Q0D8N4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene1043 biogeco3 v1.0 1220
AutoFact: putative alpha/beta-hydrolase-like protein [Arabidopsis thaliana] gb|AAM20145.1| unknown protein [Arabidopsis thaliana] gb|AAM51236.1| unknown protein [Arabidopsis thaliana] gb|AAM65043.1| unknown [Arabidopsis thaliana] gb|AEE35617.1| putative alpha/beta- 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha beta-hydrolase-like protein 0.0
C-terminus
biog3_v1.0_unigene1133 biogeco3 v1.0 760
AutoFact: thylakoid rhodanese-like protein [Arabidopsis thaliana] sp|Q9M158.2|Y4105_ARATH RecName: Full=Uncharacterized protein At4g01050, chloroplastic; Flags: Precursor gb|AAL09804.1| AT4g01050/F2N1_31 [Arabidopsis thaliana] gb|AAL15331.1| AT4g01050/F2N1_31 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01050 f2n1_31 0.0
Internal
biog3_v1.0_unigene1165 biogeco3 v1.0 676
AutoFact: stress enhanced protein 2 [Arabidopsis thaliana] gb|AAF61626.1|AF133717_1 stress enhanced protein 2 [Arabidopsis thaliana] gb|AAD20414.1| expressed protein [Arabidopsis thaliana] gb|AAM60969.1| unknown [Arabidopsis thaliana] gb|AEC07247.1| stress enhanced 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: stress enhanced protein 2 0.0
Putative Complete
biog3_v1.0_unigene1210 biogeco3 v1.0 441
AutoFact: SOUL heme-binding protein [Arabidopsis thaliana] gb|AAL38336.1| unknown protein [Arabidopsis thaliana] gb|AAN15391.1| unknown protein [Arabidopsis thaliana] gb|AED92799.1| SOUL heme-binding protein [Arabidopsis thaliana] 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: soul heme-binding protein 0.0
N-terminus
biog3_v1.0_unigene1223 biogeco3 v1.0 715
AutoFact: PREDICTED: similar to SPPA (signal peptide peptidase); protease IV/ serine-type endopeptidase n=1 Tax=Vitis vinifera RepID=UPI000198502A 0.0
FL-Next: sp=DNA-directed RNA polymerase; Vitis vinifera (Grape). 0.0
Blast2go: protease 4-like 0.0
Internal
biog3_v1.0_unigene1428 biogeco3 v1.0 822
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene1622 biogeco3 v1.0 163
AutoFact: putative photosystem II core complex proteins psbY, chloroplast precursor (L-arginine metabolising enzyme) (L-AME) [Oryza sativa Japonica Group] gb|EAZ05418.1| hypothetical protein OsI_27630 [Oryza sativa Indica Group] dbj|BAG90836.1| unnamed protein prod 2.0e-17
Blast2go: at1g67740 f12a21_13 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain