Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene32 biogeco3 v1.0 372
AutoFact: putative xyloglucan glycosyltransferase 5 [Arabidopsis thaliana] sp|Q9SB75.1|CSLC5_ARATH RecName: Full=Probable xyloglucan glycosyltransferase 5; AltName: Full=Cellulose synthase-like protein C5; Short=AtCslC5 emb|CAA19764.1| putative protein [Arabidopsis 0.0
FL-Next: tr=Cellulose synthase-like A2; Pinus taeda (Loblolly pine). 0.0
Blast2go: probable xyloglucan glycosyltransferase 5-like 0.0
Internal
biog3_v1.0_unigene33 biogeco3 v1.0 743
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
C-terminus
biog3_v1.0_unigene53 biogeco3 v1.0 1053
AutoFact: TATA-box binding protein [Phaseolus vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tata-binding protein 0.0
Complete
biog3_v1.0_unigene63 biogeco3 v1.0 1154
AutoFact: glucan endo-1,3-beta-glucosidase 11 [Arabidopsis thaliana] sp|Q8L868.1|E1311_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 11; AltName: Full=(1->3)-beta-glucan endohydrolase 11; Short=(1->3)-beta-glucanase 11; AltName: Full=Beta-1,3-endoglucanase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene96 biogeco3 v1.0 370
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Internal
biog3_v1.0_unigene101 biogeco3 v1.0 632
AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
Putative N-terminus
biog3_v1.0_unigene114 biogeco3 v1.0 339
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene115 biogeco3 v1.0 279
AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic leucine zipper transcription factor-like protein 0.0
Internal
biog3_v1.0_unigene118 biogeco3 v1.0 383
AutoFact: Dof zinc finger protein 12 n=1 Tax=Hordeum vulgare subsp. vulgare RepID=A5HWG1_HORVD 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dof zinc finger protein 2.41959e-40
N-terminus
biog3_v1.0_unigene122 biogeco3 v1.0 1576
AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt3 0.0
C-terminus
biog3_v1.0_unigene143 biogeco3 v1.0 799
AutoFact: Protein binding protein n=3 Tax=Andropogoneae RepID=B6SPB5_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
Putative C-terminus
biog3_v1.0_unigene145 biogeco3 v1.0 763
AutoFact: trans-2-enoyl-CoA reductase [Dictyostelium discoideum AX4] sp|Q54YT4.1|MECR_DICDI RecName: Full=Trans-2-enoyl-CoA reductase, mitochondrial; Flags: Precursor gb|EAL68220.1| trans-2-enoyl-CoA reductase [Dictyostelium discoideum AX4] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trans-2-enoyl- reductase 0.0
Complete
biog3_v1.0_unigene162 biogeco3 v1.0 178
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain containing protein 2.25605e-23
Internal
biog3_v1.0_unigene165 biogeco3 v1.0 738
AutoFact: Putative serine/threonine kinase n=2 Tax=rosids RepID=Q84U32_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine kinase 0.0
Complete
biog3_v1.0_unigene187 biogeco3 v1.0 420
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 7.0e-31
FL-Next: sp=Squamosa promoter-binding-like protein 16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 6.92821e-38
Internal
biog3_v1.0_unigene197 biogeco3 v1.0 449
AutoFact: putative basic-leucine zipper transcription factor bZIP69 [Arabidopsis thaliana] gb|AAF80130.1|AC024174_12 Contains similarity to a b-Zip binding protein from Arabidopsis thaliana gb|Z86093 and contains a b-Zip transcription factor PF|00170 domain. ESTs g 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 21 0.0
C-terminus
biog3_v1.0_unigene201 biogeco3 v1.0 519
AutoFact: replication licensing factor MCM7 homologue [Zea mays] emb|CAC44902.1| replication licensing factor MCM7 homologue [Zea mays] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein prolifera 0.0
N-terminus
biog3_v1.0_unigene214 biogeco3 v1.0 454
AutoFact: dual specificity protein phosphatase 1 [Arabidopsis thaliana] emb|CAA77232.1| DsPTP1 protein [Arabidopsis thaliana] gb|AEE76784.1| dual specificity protein phosphatase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dual specificity protein phosphatase 1 0.0
C-terminus
biog3_v1.0_unigene237 biogeco3 v1.0 777
AutoFact: Inducer of CBF expression 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZF3_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor ice1 0.0
N-terminus
biog3_v1.0_unigene260 biogeco3 v1.0 402
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 1.0e-37
FL-Next: tr=Os02g0797400 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: at2g07360-like protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain