Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene25938 biogeco3 v1.0 417
• AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bzip transcription factor 0.0
Putative N-terminus
biog3_v1.0_unigene25957 biogeco3 v1.0 307
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
biog3_v1.0_unigene25965 biogeco3 v1.0 317
• AutoFact: Serine/threonine-protein phosphatase n=2 Tax=Embryophyta RepID=A9TZL9_PHYPA 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene25990 biogeco3 v1.0 226
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 9.0e-26
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2a 1.93918e-30
N-terminus
biog3_v1.0_unigene26000 biogeco3 v1.0 275
• AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
• Blast2go: phytochrome-interacting factor 0.0
Coding
biog3_v1.0_unigene26070 biogeco3 v1.0 64
• AutoFact: transcription factor bHLH95 [Arabidopsis thaliana] sp|Q9FXA3.2|BH095_ARATH RecName: Full=Transcription factor bHLH95; AltName: Full=Basic helix-loop-helix protein 95; Short=AtbHLH95; Short=bHLH 95; AltName: Full=Protein RETARDED GROWTH OF EMBRYO 1; AltNam 7.0e-07
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene26075 biogeco3 v1.0 257
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u2 snrnp auxiliary small 0.0
C-terminus
biog3_v1.0_unigene26124 biogeco3 v1.0 348
• AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: leucine-rich receptor-like protein kinase bam1 0.0
Internal
biog3_v1.0_unigene26163 biogeco3 v1.0 304
• AutoFact: putative growth-regulating factor 5 [Zea mays] gb|ABQ01218.1| putative growth-regulating factor 5 [Zea mays] 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene26165 biogeco3 v1.0 229
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 5 -3 exoribonuclease 3-like 0.0
Internal
biog3_v1.0_unigene26173 biogeco3 v1.0 209
• AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene26180 biogeco3 v1.0 192
• AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9S8S4_RICCO 0.0
• FL-Next: sp=Histone-lysine N-methyltransferase SUVR5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone-lysine n-methyltransferase suvr5-like 0.0
Internal
biog3_v1.0_unigene26241 biogeco3 v1.0 282
• AutoFact: CONSTANS interacting protein 2a n=1 Tax=Solanum lycopersicum RepID=Q2VY18_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccaat-binding transcription 0.0
Internal
biog3_v1.0_unigene26287 biogeco3 v1.0 452
• AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pathogenesis-related homeodomain protein 7.47012e-18
Putative N-terminus
biog3_v1.0_unigene26293 biogeco3 v1.0 272
• AutoFact: Caprin-1_C multi-domain protein 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger protein 1.05389e-34
C-terminus
biog3_v1.0_unigene26297 biogeco3 v1.0 362
• AutoFact: Class III homeodomain leucine zipper protein n=6 Tax=Spermatophyta RepID=E7DX26_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene26306 biogeco3 v1.0 484
• AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin b 0.0
Internal
biog3_v1.0_unigene26340 biogeco3 v1.0 182
• AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: wd repeat-containing 0.0
Internal
biog3_v1.0_unigene26351 biogeco3 v1.0 191
• AutoFact: transcription factor DcMYB5 [Daucus carota] 0.0
• FL-Next: tr=MYB-like protein; Taxus globosa. 0.0
• Blast2go: transcription factor tt2-like 0.0
Internal
biog3_v1.0_unigene26376 biogeco3 v1.0 225
• AutoFact: CONSTANS interacting protein 2a n=1 Tax=Solanum lycopersicum RepID=Q2VY18_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccaat-binding transcription 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain