Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene24764 biogeco3 v1.0 632
AutoFact: Carbon catabolite repressor protein, putative n=1 Tax=Ricinus communis RepID=B9RMY1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized calcium-binding protein at1g02270-like 0.0
Internal
biog3_v1.0_unigene24775 biogeco3 v1.0 175
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9Q7_PICSI 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
unknown
biog3_v1.0_unigene24795 biogeco3 v1.0 355
AutoFact: Cyclin-dependent kinases regulatory subunit 1 n=8 Tax=Magnoliophyta RepID=CKS1_ORYSJ 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 0.0
Putative Complete
biog3_v1.0_unigene24805 biogeco3 v1.0 817
AutoFact: Putative DnaJ protein n=1 Tax=Camellia sinensis RepID=Q2L989_CAMSI 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein binding protein 0.0
Complete
biog3_v1.0_unigene24838 biogeco3 v1.0 672
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
Putative C-terminus
biog3_v1.0_unigene24853 biogeco3 v1.0 220
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 5.0e-11
Blast2go: 60s acidic ribosomal protein p3 1.32677e-21
unknown
biog3_v1.0_unigene24888 biogeco3 v1.0 75
AutoFact: Maintenance of ploidy protein MOB1 (MPS1 binder 1) n=16 Tax=Embryophyta RepID=Q9FHI1_ARATH 0.0
Blast2go: mps one binder kinase activator-like 1a 0.0
unknown
biog3_v1.0_unigene24890 biogeco3 v1.0 117
AutoFact: HASTY [Arabidopsis thaliana] 2.0e-34
Blast2go: protein hasty 1-like 0.0
unknown
biog3_v1.0_unigene24901 biogeco3 v1.0 215
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_818.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRX8_VITVI 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 3b subunit 2-like 0.0
Putative C-terminus
biog3_v1.0_unigene24910 biogeco3 v1.0 272
AutoFact: RNA pol II accessory factor CDC73-like protein [Arabidopsis thaliana] dbj|BAB01474.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38878.1| unknown protein [Arabidopsis thaliana] gb|AAN13180.1| unknown protein [Arabidopsis thaliana] gb|AEE76656.1| 0.0
Blast2go: rna polymerase ii assessory factor cdc73p 0.0
unknown
biog3_v1.0_unigene24919 biogeco3 v1.0 231
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Internal
biog3_v1.0_unigene24921 biogeco3 v1.0 145
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: b-class mads-box transcription factor 0.0
Putative C-terminus
biog3_v1.0_unigene24941 biogeco3 v1.0 209
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integrin-linked protein kinase family protein 0.0
Internal
biog3_v1.0_unigene24943 biogeco3 v1.0 506
AutoFact: Huntingtin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9S2T8_RICCO 1.0e-28
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 0.0
Blast2go: histone-lysine n-methyltransferase ashh2-like 1.01747e-33
Internal
biog3_v1.0_unigene24950 biogeco3 v1.0 115
AutoFact: [R] COG0457 FOG: TPR repeat 5.0e-10
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein brushy 0.0
Internal
biog3_v1.0_unigene24957 biogeco3 v1.0 312
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene24964 biogeco3 v1.0 83
AutoFact: DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR78_CATRO 2.0e-30
Blast2go: hdzip i protein 0.0
unknown
biog3_v1.0_unigene25033 biogeco3 v1.0 339
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
Coding
biog3_v1.0_unigene25038 biogeco3 v1.0 232
AutoFact: DnaJ-like protein isoform n=1 Tax=Solanum phureja RepID=Q0GA60_9SOLN 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: like protein 0.0
N-terminus
biog3_v1.0_unigene25076 biogeco3 v1.0 48
AutoFact: eukaryotic translation initiation factor 5 [Zea mays] 0.0
Blast2go: eukaryotic translation initiation factor 5 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain