Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene24041 biogeco3 v1.0 343
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24069 biogeco3 v1.0 333
AutoFact: 5'-3' exonuclease family protein n=4 Tax=Arabidopsis RepID=Q94A33_ARATH 1.0e-32
FL-Next: sp=Exonuclease 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 4.29358e-42
Internal
biog3_v1.0_unigene24081 biogeco3 v1.0 276
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor-like protein kinase 0.0
Internal
biog3_v1.0_unigene24084 biogeco3 v1.0 99
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
Blast2go: nuclear transcription factor y subunit b-3 0.0
unknown
biog3_v1.0_unigene24119 biogeco3 v1.0 209
AutoFact: TauD domain containing protein 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24137 biogeco3 v1.0 331
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
unknown
biog3_v1.0_unigene24141 biogeco3 v1.0 368
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
biog3_v1.0_unigene24142 biogeco3 v1.0 196
AutoFact: Transcription factor bHLH62 n=1 Tax=Arabidopsis thaliana RepID=BH062_ARATH 7.0e-31
Blast2go: transcription factor bpe 0.0
unknown
biog3_v1.0_unigene24148 biogeco3 v1.0 248
AutoFact: TGA10 transcription factor n=1 Tax=Nicotiana tabacum RepID=Q52MZ2_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor hbp-1b -like 0.0
Putative N-terminus
biog3_v1.0_unigene24158 biogeco3 v1.0 240
AutoFact: R2R3-Myb4 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPT6_PINPS 0.0
FL-Next: tr=R2R3-MYB transcription factor; Pinus taeda (Loblolly pine). 0.0
Blast2go: transcription factor myb46-like 0.0
Internal
biog3_v1.0_unigene24171 biogeco3 v1.0 236
AutoFact: Polyketide_cyc2 domain containing protein 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl8 0.0
C-terminus
biog3_v1.0_unigene24244 biogeco3 v1.0 348
AutoFact: LisH domain containing protein 4.0e-05
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ddb1- and cul4-associated factor homolog 1-like 0.0
Internal
biog3_v1.0_unigene24260 biogeco3 v1.0 220
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9REC4_RICCO 0.0
Blast2go: serine threonine kinase 0.0
Coding
biog3_v1.0_unigene24262 biogeco3 v1.0 284
AutoFact: CBL-interacting protein kinase 03 n=2 Tax=Selaginella moellendorffii RepID=C4P7R5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24305 biogeco3 v1.0 236
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
biog3_v1.0_unigene24333 biogeco3 v1.0 169
AutoFact: cyclin B1 [Allium cepa] 0.0
Blast2go: cyclin b1 0.0
unknown
biog3_v1.0_unigene24360 biogeco3 v1.0 239
AutoFact: Unassigned protein
Blast2go: protein phytoclock 1 0.0
unknown
biog3_v1.0_unigene24402 biogeco3 v1.0 96
AutoFact: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Arabidopsis thaliana] sp|Q8GZB6.2|SUVH4_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; AltName: Full=Histone H3-K9 methyltransferase 4; Short=H3-K9-HMTase 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh4-like 0.0
unknown
biog3_v1.0_unigene24421 biogeco3 v1.0 235
AutoFact: ribosomal protein S24/S35 [Arabidopsis thaliana] ref|NP_850608.1| ribosomal protein S24/S35 [Arabidopsis thaliana] gb|AAG40012.1|AF324661_1 AT3g18240 [Arabidopsis thaliana] gb|AAG41489.1|AF326907_1 unknown protein [Arabidopsis thaliana] gb|AAK15567.1|AF34 0.0
Blast2go: ribosomal protein s24 s35 0.0
unknown
biog3_v1.0_unigene24424 biogeco3 v1.0 259
AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate 0.0
Blast2go: uridylate kinase 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain