Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene23508 biogeco3 v1.0 377
• AutoFact: cyclin-dependent kinase F-1 [Arabidopsis thaliana] ref|NP_849468.1| cyclin-dependent kinase F-1 [Arabidopsis thaliana] sp|O80345.1|CDKF1_ARATH RecName: Full=Cyclin-dependent kinase F-1; Short=CDKF;1; AltName: Full=CDK-activating kinase 1-At; Short=CAK1-At 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase f-1 0.0
N-terminus
biog3_v1.0_unigene23510 biogeco3 v1.0 233
• AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: receptor-like protein kinase 0.0
Internal
biog3_v1.0_unigene23513 biogeco3 v1.0 298
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
• FL-Next: sp=Squamosa promoter-binding-like protein 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23515 biogeco3 v1.0 248
• AutoFact: Mitotic spindle checkpoint protein MAD2 n=4 Tax=Andropogoneae RepID=MAD2_MAIZE 0.0
• Blast2go: mitotic spindle checkpoint protein mad2 0.0
unknown
biog3_v1.0_unigene23520 biogeco3 v1.0 418
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: c2-h2 zinc finger protein 0.0
Internal
biog3_v1.0_unigene23522 biogeco3 v1.0 278
• AutoFact: glucan endo-1,3-beta-glucosidase 11 [Arabidopsis thaliana] sp|Q8L868.1|E1311_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 11; AltName: Full=(1->3)-beta-glucan endohydrolase 11; Short=(1->3)-beta-glucanase 11; AltName: Full=Beta-1,3-endoglucanase 1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene23543 biogeco3 v1.0 206
• AutoFact: E3 ubiquitin-protein ligase HOS1 [Arabidopsis thaliana] sp|Q84JU6.1|HOS1_ARATH RecName: Full=E3 ubiquitin-protein ligase HOS1; AltName: Full=Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1; AltName: Full=RING finger protein HOS1 gb|AAO42259.1| un 6.0e-38
• Blast2go: e3 ubiquitin-protein ligase hos1-like 0.0
unknown
biog3_v1.0_unigene23548 biogeco3 v1.0 295
• AutoFact: pfam08839, CDT1, DNA replication factor CDT1 like 1.0e-28
• Blast2go: cdt1-like protein chloroplastic-like 7.66257e-39
Coding
biog3_v1.0_unigene23583 biogeco3 v1.0 199
• AutoFact: Auxin-induced protein 2 n=2 Tax=Pinus RepID=Q7XYT5_PINTA 0.0
• FL-Next: tr=Putative auxin induced transcription factor Aux/IAA; Pinus pinaster (Maritime pine). 0.0
• Blast2go: auxin-responsive protein 0.0
N-terminus
biog3_v1.0_unigene23593 biogeco3 v1.0 313
• AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
• Blast2go: two-component response regulator-like aprr1-like 0.0
unknown
biog3_v1.0_unigene23613 biogeco3 v1.0 341
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adagio protein 1 0.0
Putative N-terminus
biog3_v1.0_unigene23660 biogeco3 v1.0 227
• AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein at1g67340-like 0.0
C-terminus
biog3_v1.0_unigene23675 biogeco3 v1.0 522
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
N-terminus
biog3_v1.0_unigene23712 biogeco3 v1.0 371
• AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein kinase ht1-like 0.0
Putative C-terminus
biog3_v1.0_unigene23719 biogeco3 v1.0 225
• AutoFact: AMP deaminase n=2 Tax=Arabidopsis RepID=AMPD_ARATH 4.0e-14
• FL-Next: sp=AMP deaminase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: amp deaminase 5.03647e-17
Internal
biog3_v1.0_unigene23736 biogeco3 v1.0 313
• AutoFact: amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] sp|P42744.1|ULA1_ARATH RecName: Full=NEDD8-activating enzyme E1 regulatory subunit; AltName: Full=Auxin-resistance protein AXR1 gb|AAB59348.1| ubiquitin-activating enzyme E1 [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nedd8-activating enzyme e1 regulatory subunit 0.0
Putative N-terminus
biog3_v1.0_unigene23748 biogeco3 v1.0 330
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 26s proteasome regulatory subunit n2 0.0
Internal
biog3_v1.0_unigene23770 biogeco3 v1.0 177
• AutoFact: PREDICTED: similar to FIO1 (FIONA1) n=1 Tax=Vitis vinifera RepID=UPI0001982DB3 0.0
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: ribosomal rna large subunit methyltransferase f 0.0
Internal
biog3_v1.0_unigene23788 biogeco3 v1.0 348
• AutoFact: Mitotic cyclin A1-like protein n=1 Tax=Persea americana RepID=D2KQP4_PERAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin a-like protein 0.0
Internal
biog3_v1.0_unigene23794 biogeco3 v1.0 205
• AutoFact: mRNA cap guanine-N7 methyltransferase n=1 Tax=Picea sitchensis RepID=C0PS33_PICSI 0.0
• FL-Next: sp=mRNA cap guanine-N7 methyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mrna cap guanine-n7 methyltransferase 1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain