Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene23227 biogeco3 v1.0 243
AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: uridylate kinase 0.0
Internal
biog3_v1.0_unigene23228 biogeco3 v1.0 261
AutoFact: SMC-like protein [Arabidopsis thaliana] gb|AAD54770.1|AF120933_1 SMC-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
Putative C-terminus
biog3_v1.0_unigene23230 biogeco3 v1.0 194
AutoFact: Elongin_A domain containing protein 3.0e-08
Blast2go: uncharacterized protein 0.0
unknown
biog3_v1.0_unigene23283 biogeco3 v1.0 223
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
FL-Next: sp=Two-component response regulator-like PRR1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
Putative N-terminus
biog3_v1.0_unigene23308 biogeco3 v1.0 297
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 3-i 0.0
Internal
biog3_v1.0_unigene23321 biogeco3 v1.0 189
AutoFact: aprataxin [Arabidopsis thaliana] sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcrip 5.0e-32
Blast2go: transcription factor bhlh140-like 2.10195e-43
unknown
biog3_v1.0_unigene23322 biogeco3 v1.0 282
AutoFact: WS0273.BR_F03 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0273_F03 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23323 biogeco3 v1.0 299
AutoFact: putative GANP protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: leukocyte receptor cluster member-like protein 0.0
Internal
biog3_v1.0_unigene23336 biogeco3 v1.0 290
AutoFact: NIN like protein 7 [Arabidopsis thaliana] sp|Q84TH9.2|NLP7_ARATH RecName: Full=Protein NLP7; Short=AtNLP7; AltName: Full=NIN-like protein 7; AltName: Full=Nodule inception protein-like protein 7 gb|AAB63621.1| unknown protein [Arabidopsis thaliana] emb|CA 1.0e-13
FL-Next: sp=Protein NLP7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rwp-rk domain-containing protein 4.30347e-16
Internal
biog3_v1.0_unigene23341 biogeco3 v1.0 145
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene23356 biogeco3 v1.0 278
AutoFact: centromere/kinetochore protein ZW10 [Arabidopsis thaliana] sp|O48626.1|ZW10_ARATH RecName: Full=Centromere/kinetochore protein zw10 homolog gb|AAB88246.1| AtZW10 [Arabidopsis thaliana] gb|AAL47437.1| At2g32900/T21L14.16 [Arabidopsis thaliana] gb|AEC08759. 0.0
Blast2go: centromere kinetochore protein zw10 homolog 0.0
unknown
biog3_v1.0_unigene23365 biogeco3 v1.0 127
AutoFact: protein little nuclei4 [Arabidopsis thaliana] sp|Q9FLH0.1|NMCP_ARATH RecName: Full=Putative nuclear matrix constituent protein 1-like protein; Short=NMCP1-like dbj|BAB10684.1| nuclear matrix constituent protein 1 (NMCP1)-like [Arabidopsis thaliana] gb|AED 0.0
Blast2go: branched-chain-amino-acid aminotransferase 5 0.0
unknown
biog3_v1.0_unigene23375 biogeco3 v1.0 302
AutoFact: GTP-binding protein [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding nuclear protein ran-3-like 0.0
C-terminus
biog3_v1.0_unigene23401 biogeco3 v1.0 314
AutoFact: Os06g0558700 protein n=5 Tax=Oryza sativa RepID=C7J4C8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 0.0
Internal
biog3_v1.0_unigene23403 biogeco3 v1.0 365
AutoFact: inositol phosphate kinase [Glycine max] 0.0
FL-Next: sp=Inositol-tetrakisphosphate 1-kinase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: inositol phosphate kinase 0.0
Internal
biog3_v1.0_unigene23409 biogeco3 v1.0 196
AutoFact: WRC multi-domain protein 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23442 biogeco3 v1.0 177
AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box domain-containing protein 1.4013e-45
N-terminus
biog3_v1.0_unigene23463 biogeco3 v1.0 153
AutoFact: perakine reductase [Rauvolfia serpentina] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldo keto 0.0
Putative C-terminus
biog3_v1.0_unigene23466 biogeco3 v1.0 276
AutoFact: SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] gb|AED91300.1| SWIB/MDM2 and Plus-3 and GYF domain-contai 1.0e-31
FL-Next: sp=Zinc finger CCCH domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 44-like 0.0
Internal
biog3_v1.0_unigene23480 biogeco3 v1.0 235
AutoFact: Serine/threonine-protein kinase SRK2E n=6 Tax=rosids RepID=SRK2E_ARATH 0.0
Blast2go: protein kinase-like protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain