Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene22312 biogeco3 v1.0 233
AutoFact: Probable inorganic phosphate transporter 1-8 n=3 Tax=Oryza sativa RepID=PHT18_ORYSJ 0.0
FL-Next: tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: phosphate transporter 0.0
Internal
biog3_v1.0_unigene22321 biogeco3 v1.0 411
AutoFact: Beta-amylase n=1 Tax=Populus trichocarpa RepID=B9HKX1_POPTR 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene22334 biogeco3 v1.0 277
AutoFact: [BK] COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor gte8-like 0.0
Putative N-terminus
biog3_v1.0_unigene22346 biogeco3 v1.0 495
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9N8L1_POPTR 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ASHH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase ashh3-like 0.0
Internal
biog3_v1.0_unigene22347 biogeco3 v1.0 308
AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
Blast2go: dna topoisomerase 6 subunit a-like 0.0
unknown
biog3_v1.0_unigene22377 biogeco3 v1.0 289
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
Blast2go: atp-dependent helicase brm 0.0
Putative coding
biog3_v1.0_unigene22421 biogeco3 v1.0 361
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
Internal
biog3_v1.0_unigene22429 biogeco3 v1.0 298
AutoFact: Poly(A) polymerase alpha, putative n=1 Tax=Ricinus communis RepID=B9SFV5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene22458 biogeco3 v1.0 316
AutoFact: putative protein phosphatase 2C 9 [Arabidopsis thaliana] sp|Q9LME4.1|P2C09_ARATH RecName: Full=Probable protein phosphatase 2C 9; Short=AtPP2C09; AltName: Full=Phytochrome-associated protein phosphatase 2C; Short=PAPP2C gb|AAF87263.1|AC068562_10 Strong si 0.0
Blast2go: protein phosphatase 0.0
unknown
biog3_v1.0_unigene22475 biogeco3 v1.0 334
AutoFact: phy rapidly regulated 2 protein [Arabidopsis thaliana] emb|CAB88302.1| putative protein [Arabidopsis thaliana] gb|AAR92241.1| At3g58850 [Arabidopsis thaliana] gb|AAS76234.1| At3g58850 [Arabidopsis thaliana] dbj|BAF01099.1| hypothetical protein [Arabidopsi 2.0e-07
Blast2go: phy rapidly regulated 2 protein 0.0
unknown
biog3_v1.0_unigene22544 biogeco3 v1.0 152
AutoFact: Phosphoglycerate kinase n=2 Tax=Pinaceae RepID=A9NVA3_PICSI 0.0
Blast2go: phosphoglycerate kinase 0.0
unknown
biog3_v1.0_unigene22574 biogeco3 v1.0 169
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
biog3_v1.0_unigene22583 biogeco3 v1.0 220
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb02g019320; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: enhanced downy mildew 2 0.0
Internal
biog3_v1.0_unigene22585 biogeco3 v1.0 164
AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
Blast2go: ocs element-binding 0.0
unknown
biog3_v1.0_unigene22617 biogeco3 v1.0 440
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SLJ7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene22638 biogeco3 v1.0 400
AutoFact: DNA damage-binding protein 1a n=5 Tax=Brassicaceae RepID=DDB1A_ARATH 0.0
FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uv damaged dna binding protein 1 0.0
Internal
biog3_v1.0_unigene22652 biogeco3 v1.0 205
AutoFact: DNA-damage-repair/toleration protein DRT102, putative n=1 Tax=Ricinus communis RepID=B9RES2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-damage-repair toleration protein drt102 0.0
Internal
biog3_v1.0_unigene22676 biogeco3 v1.0 198
AutoFact: histone acetyltransferase type B catalytic subunit [Arabidopsis thaliana] sp|Q9FJT8.1|HATB_ARATH RecName: Full=Histone acetyltransferase type B catalytic subunit; Short=HAT B dbj|BAB09892.1| histone acetyltransferase HAT B [Arabidopsis thaliana] gb|ABF572 3.0e-11
Blast2go: histone acetyltransferase type b catalytic subunit 0.0
unknown
biog3_v1.0_unigene22698 biogeco3 v1.0 170
AutoFact: YDG_SRA multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal
biog3_v1.0_unigene22734 biogeco3 v1.0 314
AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip transcription factor 1.00155e-23
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain