Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene21655 biogeco3 v1.0 279
AutoFact: Arf gtpase-activating protein, putative n=1 Tax=Ricinus communis RepID=B9SP31_RICCO 0.0
FL-Next: sp=Probable ADP-ribosylation factor GTPase-activating protein AGD6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: adp-ribosylation factor gtpase-activating protein agd6 0.0
Internal
biog3_v1.0_unigene21660 biogeco3 v1.0 304
AutoFact: Cytosine-specific methyltransferase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TB44_VITVI 0.0
FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
Blast2go: dna methyltransferase 0.0
Internal
biog3_v1.0_unigene21706 biogeco3 v1.0 184
AutoFact: Serine/threonine-protein phosphatase PP2A-3 catalytic subunit n=30 Tax=Embryophyta RepID=PP2A3_ORYSJ 0.0
Blast2go: protein phosphatase 2a catalytic subunit 0.0
unknown
biog3_v1.0_unigene21720 biogeco3 v1.0 282
AutoFact: putative basic-leucine zipper transcription factor bZIP69 [Arabidopsis thaliana] gb|AAF80130.1|AC024174_12 Contains similarity to a b-Zip binding protein from Arabidopsis thaliana gb|Z86093 and contains a b-Zip transcription factor PF|00170 domain. ESTs g 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 21 0.0
Putative N-terminus
biog3_v1.0_unigene21727 biogeco3 v1.0 310
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=A9NUQ6_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein phosphatase 7 0.0
Internal
biog3_v1.0_unigene21750 biogeco3 v1.0 178
AutoFact: U-box domain-containing protein 9 [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91644.1| AT3g07 5.0e-30
Blast2go: protein 8.23859e-36
unknown
biog3_v1.0_unigene21762 biogeco3 v1.0 365
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RJU4_RICCO 7.0e-08
Blast2go: conserved peptide upstream open reading frame 37 0.0
unknown
biog3_v1.0_unigene21803 biogeco3 v1.0 270
AutoFact: DUF367 multi-domain protein 0.0
Blast2go: probable ribosome biogenesis protein c16orf42 homolog 0.0
unknown
biog3_v1.0_unigene21809 biogeco3 v1.0 267
AutoFact: CDC27 domain containing protein 4.0e-06
FL-Next: sp=DNA-binding protein BIN4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-binding protein bin4 0.0
Internal
biog3_v1.0_unigene21821 biogeco3 v1.0 333
AutoFact: E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] ref|NP_001119465.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97324.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97328.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 SUMO-protein ligase SIZ1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21841 biogeco3 v1.0 281
AutoFact: Aspartate aminotransferase n=1 Tax=Picea sitchensis RepID=A9NUJ0_PICSI 0.0
FL-Next: sp=Aspartate aminotransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartate aminotransferase 0.0
N-terminus
biog3_v1.0_unigene21850 biogeco3 v1.0 245
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene21862 biogeco3 v1.0 305
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene21875 biogeco3 v1.0 297
AutoFact: cyclin [Adiantum capillus-veneris] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene21911 biogeco3 v1.0 364
AutoFact: DUF298 domain containing protein 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21913 biogeco3 v1.0 340
AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN2; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeobox transcription factor kn2 0.0
Internal
biog3_v1.0_unigene21930 biogeco3 v1.0 227
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
Blast2go: b-class mads-box transcription factor 0.0
unknown
biog3_v1.0_unigene21936 biogeco3 v1.0 267
AutoFact: Putative auxin response factor 10/16/17 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY1_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 18-like 0.0
Internal
biog3_v1.0_unigene21940 biogeco3 v1.0 237
AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
unknown
biog3_v1.0_unigene21952 biogeco3 v1.0 333
AutoFact: DNA polymerase n=2 Tax=Andropogoneae RepID=C5XR76_SORBI 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain