Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene21223 biogeco3 v1.0 371
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
• Blast2go: transcription factor bhlh62-like 0.0
Putative coding
biog3_v1.0_unigene21255 biogeco3 v1.0 278
• AutoFact: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Arabidopsis thaliana] sp|Q8GZB6.2|SUVH4_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; AltName: Full=Histone H3-K9 methyltransferase 4; Short=H3-K9-HMTase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone-lysine n- h3 lysine-9 specific suvh4-like 0.0
Internal
biog3_v1.0_unigene21256 biogeco3 v1.0 404
• AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
• FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21266 biogeco3 v1.0 334
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb-cc type transfactor 0.0
N-terminus
biog3_v1.0_unigene21336 biogeco3 v1.0 125
• AutoFact: cyclophilin 59 [Arabidopsis thaliana] gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: peptidyl-prolyl cis-trans isomerase-like 4-like 0.0
Internal
biog3_v1.0_unigene21363 biogeco3 v1.0 237
• AutoFact: chloroplast protein translocon component Tic40 precursor [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: translocon tic40 0.0
Internal
biog3_v1.0_unigene21372 biogeco3 v1.0 232
• AutoFact: cullin 4 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Cullin-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-protein cullin 4 0.0
Internal
biog3_v1.0_unigene21469 biogeco3 v1.0 310
• AutoFact: cell cycle control crn (crooked neck) protein-like [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: pre-mrna-splicing factor clf1 0.0
Internal
biog3_v1.0_unigene21478 biogeco3 v1.0 276
• AutoFact: Unassigned protein
• Blast2go: unknown [Picea sitchensis] 1.51258e-29
unknown
biog3_v1.0_unigene21535 biogeco3 v1.0 183
• AutoFact: Xenotropic and polytropic murine leukemia virus receptor ids-4, putative n=1 Tax=Ricinus communis RepID=B9SES9_RICCO 0.0
• Blast2go: spx domain-containing protein 3-like 0.0
unknown
biog3_v1.0_unigene21554 biogeco3 v1.0 298
• AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly 0.0
Internal
biog3_v1.0_unigene21568 biogeco3 v1.0 251
• AutoFact: Pseudo response regulator n=1 Tax=Selaginella moellendorffii RepID=D8T4E0_SELML 0.0
• Blast2go: pseudo response regulator 0.0
unknown
biog3_v1.0_unigene21581 biogeco3 v1.0 349
• AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene21587 biogeco3 v1.0 321
• AutoFact: Protein kinase [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
Internal
biog3_v1.0_unigene21590 biogeco3 v1.0 154
• AutoFact: end binding protein 1C [Arabidopsis thaliana] dbj|BAB09646.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65311.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] dbj|BAD43258.1| unknown protein [Arabidopsis thaliana] gb|AB 0.0
• Blast2go: microtubule-associated protein rp eb family member 1-like 0.0
unknown
biog3_v1.0_unigene21592 biogeco3 v1.0 336
• AutoFact: Auxin response factor n=1 Tax=Physcomitrella patens RepID=D2NUD7_9BRYO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor 10 0.0
Internal
biog3_v1.0_unigene21609 biogeco3 v1.0 262
• AutoFact: myb domain protein 20 [Arabidopsis thaliana] gb|AAG51765.1|AC066691_5 myb-related transcription factor, putative; 17635-18559 [Arabidopsis thaliana] gb|AAS10035.1| MYB transcription factor [Arabidopsis thaliana] gb|ABI49451.1| At1g66230 [Arabidopsis thali 0.0
• Blast2go: myb-related transcription factor 0.0
unknown
biog3_v1.0_unigene21617 biogeco3 v1.0 266
• AutoFact: type-B response regulator [Catharanthus roseus] 0.0
• Blast2go: type-b response regulator 0.0
unknown
biog3_v1.0_unigene21650 biogeco3 v1.0 224
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Internal
biog3_v1.0_unigene21654 biogeco3 v1.0 354
• AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 0.0
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain