Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene20885 biogeco3 v1.0 188
AutoFact: auxin-responsive protein IAA13 [Arabidopsis thaliana] ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana] gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana] gb|AAC49054.1| IAA13 [Arabidopsis thaliana] gb|AA 2.0e-10
Blast2go: auxin-responsive protein iaa13 6.91375e-17
unknown
biog3_v1.0_unigene20913 biogeco3 v1.0 351
AutoFact: Auxin-responsive protein IAA7 n=1 Tax=Picea abies RepID=B2KZF8_PICAB 0.0
Blast2go: phytochrome-associated protein 1 0.0
unknown
biog3_v1.0_unigene20915 biogeco3 v1.0 132
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
unknown
biog3_v1.0_unigene20926 biogeco3 v1.0 233
AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 6.0e-17
FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter b family member 20-like 3.39552e-21
Internal
biog3_v1.0_unigene20954 biogeco3 v1.0 277
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9S8S4_RICCO 0.0
FL-Next: sp=Histone-lysine N-methyltransferase SUVR5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase suvr5-like 0.0
Internal
biog3_v1.0_unigene20970 biogeco3 v1.0 238
AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20981 biogeco3 v1.0 323
AutoFact: putative ribosomal S1 protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99860.1| S1 RNA binding domain containing protein, expressed [Oryza sativa Japonica Group] gb|EEC76515.1| hypothetical protein OsI_14295 [Oryza sativa Indica Gro 2.0e-22
Blast2go: protein 1.06389e-35
unknown
biog3_v1.0_unigene21029 biogeco3 v1.0 366
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21039 biogeco3 v1.0 289
AutoFact: ribosomal protein S1-like RNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB01847.1| unnamed protein product [Arabidopsis thaliana] gb|AAK83625.1| AT3g23700/MYM9_3 [Arabidopsis thaliana] gb|AAM98102.1| At3g23700/MYM9_3 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s1 homolog 0.0
Internal
biog3_v1.0_unigene21050 biogeco3 v1.0 437
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 9.94922e-44
FL-Next: sp=Kinesin-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinesin-like protein 0.0
Internal
biog3_v1.0_unigene21084 biogeco3 v1.0 319
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDJ8_RICCO 0.0
FL-Next: sp=Flap endonuclease GEN-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 5 -3 exonuclease-like protein 0.0
Internal
biog3_v1.0_unigene21119 biogeco3 v1.0 269
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7U6B4_VITVI 1.0e-32
Blast2go: ubiquitin carboxyl-terminal hydrolase 5-like 1.52096e-35
unknown
biog3_v1.0_unigene21125 biogeco3 v1.0 302
AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
N-terminus
biog3_v1.0_unigene21135 biogeco3 v1.0 165
AutoFact: C2H2-type zinc finger-containing protein [Arabidopsis thaliana] gb|AAK76505.1| unknown protein [Arabidopsis thaliana] gb|AAD31578.2| expressed protein [Arabidopsis thaliana] gb|AAM14308.1| unknown protein [Arabidopsis thaliana] gb|AEC09323.1| C2H2-type zi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene21152 biogeco3 v1.0 281
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SLJ7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21156 biogeco3 v1.0 299
AutoFact: Methylthioribose-1-phosphate isomerase n=1 Tax=Nicotiana tabacum RepID=MTNA_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methylthioribose-1-phosphate isomerase 0.0
Internal
biog3_v1.0_unigene21176 biogeco3 v1.0 443
AutoFact: Short-root n=1 Tax=Pinus radiata RepID=B4XI11_PINRA 0.0
FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog3_v1.0_unigene21188 biogeco3 v1.0 267
AutoFact: Calcium-binding pollen allergen n=1 Tax=Arachis hypogaea RepID=Q45W79_ARAHY 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding pollen allergen 5.10493e-42
Internal
biog3_v1.0_unigene21210 biogeco3 v1.0 206
AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
unknown
biog3_v1.0_unigene21222 biogeco3 v1.0 386
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain