Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene20464 biogeco3 v1.0 201
AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uridylate kinase 0.0
Internal
biog3_v1.0_unigene20465 biogeco3 v1.0 337
AutoFact: triacylglycerol lipase 1 [Arabidopsis thaliana] sp|Q71DJ5.1|LIP1_ARATH RecName: Full=Triacylglycerol lipase 1; Flags: Precursor gb|AAN77143.1| putative triacylglycerol/steryl ester hydrolase [Arabidopsis thaliana] gb|ABF58965.1| At2g15230 [Arabidopsis tha 0.0
FL-Next: sp=Triacylglycerol lipase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20497 biogeco3 v1.0 210
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Internal
biog3_v1.0_unigene20503 biogeco3 v1.0 282
AutoFact: phosphatidylinositol 4-kinase [Solanum tuberosum] 0.0
FL-Next: sp=Phosphatidylinositol 4-kinase beta 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol kinase 0.0
Internal
biog3_v1.0_unigene20515 biogeco3 v1.0 260
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4; 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 4-like 0.0
Putative C-terminus
biog3_v1.0_unigene20540 biogeco3 v1.0 321
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
FL-Next: sp=Kinesin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20549 biogeco3 v1.0 342
AutoFact: Phd finger protein, putative n=1 Tax=Ricinus communis RepID=B9SP39_RICCO 3.0e-17
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: set domain protein 1.17292e-20
C-terminus
biog3_v1.0_unigene20578 biogeco3 v1.0 220
AutoFact: abhydrolase domain-containing protein 13 [Danio rerio] sp|Q32LS6.1|ABHDD_DANRE RecName: Full=Abhydrolase domain-containing protein 13 gb|AAI09446.1| Zgc:123286 [Danio rerio] 2.8026e-45
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene20625 biogeco3 v1.0 348
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin related protein 0.0
Internal
biog3_v1.0_unigene20628 biogeco3 v1.0 202
AutoFact: Mitotic spindle checkpoint protein MAD2 n=4 Tax=Andropogoneae RepID=MAD2_MAIZE 0.0
FL-Next: sp=Mitotic spindle checkpoint protein MAD2; Zea mays (Maize). 0.0
Blast2go: mitotic spindle checkpoint protein mad2 0.0
Internal
biog3_v1.0_unigene20629 biogeco3 v1.0 187
AutoFact: mago nashi [Taiwania cryptomerioides] 0.0
Blast2go: mago nashi 0.0
unknown
biog3_v1.0_unigene20685 biogeco3 v1.0 270
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene20690 biogeco3 v1.0 261
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] gb|AAF88114.1|AC021043_7 Unknown protein [Arabidopsis thaliana] gb|AAK97729.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAL31130.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAM63005.1| unknown [A 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding protein 5.23021e-41
Internal
biog3_v1.0_unigene20706 biogeco3 v1.0 328
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 0.0
Blast2go: myb-cc type transfactor 0.0
unknown
biog3_v1.0_unigene20744 biogeco3 v1.0 265
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene20799 biogeco3 v1.0 299
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
Blast2go: dna binding 0.0
unknown
biog3_v1.0_unigene20804 biogeco3 v1.0 206
AutoFact: Transcription initiation factor IIB-2 n=10 Tax=rosids RepID=TF2B2_ARATH 5.0e-35
Blast2go: transcription initiation factor iib 9.48708e-35
unknown
biog3_v1.0_unigene20808 biogeco3 v1.0 471
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: g patch domain-containing protein 1 2.51327e-34
Internal
biog3_v1.0_unigene20839 biogeco3 v1.0 358
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at1g67340-like 0.0
Internal
biog3_v1.0_unigene20872 biogeco3 v1.0 323
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-cpg-binding domain 10 3.65069e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain