Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene19415 biogeco3 v1.0 140
• AutoFact: UVB-resistance protein UVR8 [Arabidopsis thaliana] 0.0
• Blast2go: rcc1 and btb domain-containing protein 0.0
unknown
biog3_v1.0_unigene19488 biogeco3 v1.0 255
• AutoFact: glucan endo-1,3-beta-glucosidase 11 [Arabidopsis thaliana] sp|Q8L868.1|E1311_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 11; AltName: Full=(1->3)-beta-glucan endohydrolase 11; Short=(1->3)-beta-glucanase 11; AltName: Full=Beta-1,3-endoglucanase 1 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene19527 biogeco3 v1.0 146
• AutoFact: Unassigned protein
• Blast2go: alpha beta-hydrolases-like protein 6.16497e-20
unknown
biog3_v1.0_unigene19535 biogeco3 v1.0 172
• AutoFact: Nuclear pre-mRNA splicing factor, component of splicing factor 3b (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JHC1_CHLRE 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: splicing factor 3b subunit 0.0
Internal
biog3_v1.0_unigene19560 biogeco3 v1.0 182
• AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
• Blast2go: hexokinase 1 0.0
unknown
biog3_v1.0_unigene19563 biogeco3 v1.0 216
• AutoFact: WS00753.C21_I19 WS-PS-N-A-8 Picea glauca cDNA clone WS00753_I19 3, mRNA sequence. 0.0
• FL-Next: tr=C2H2L domain class transcription factor; Malus domestica (Apple) (Pyrus malus). 0.0
• Blast2go: indeterminate -domain 14 protein 4.48416e-44
Internal
biog3_v1.0_unigene19570 biogeco3 v1.0 169
• AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
• Blast2go: mads-box transcription factor 3 0.0
unknown
biog3_v1.0_unigene19600 biogeco3 v1.0 154
• AutoFact: WD-repeat protein GhTTG2 [Gossypium hirsutum] gb|AAM95644.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene19623 biogeco3 v1.0 346
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: histidine kinase- dna gyrase b- and hsp90-like atpase family protein 0.0
Internal
biog3_v1.0_unigene19639 biogeco3 v1.0 135
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
• Blast2go: homeobox-leucine zipper family protein 0.0
unknown
biog3_v1.0_unigene19665 biogeco3 v1.0 188
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• Blast2go: dna damage-binding protein 1a 0.0
unknown
biog3_v1.0_unigene19669 biogeco3 v1.0 104
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky dna-binding protein 21 0.0
Internal
biog3_v1.0_unigene19691 biogeco3 v1.0 192
• AutoFact: phy rapidly regulated 2 protein [Arabidopsis thaliana] emb|CAB88302.1| putative protein [Arabidopsis thaliana] gb|AAR92241.1| At3g58850 [Arabidopsis thaliana] gb|AAS76234.1| At3g58850 [Arabidopsis thaliana] dbj|BAF01099.1| hypothetical protein [Arabidopsi 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phy rapidly regulated 2 protein 0.0
Internal
biog3_v1.0_unigene19701 biogeco3 v1.0 292
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SCL9_RICCO 1.0e-18
• Blast2go: acyl- n-acyltransferase with ring fyve phd-type zinc finger domain-containing protein 2.17577e-19
unknown
biog3_v1.0_unigene19727 biogeco3 v1.0 141
• AutoFact: Zinc finger CCCH domain-containing protein 35 n=2 Tax=Oryza sativa RepID=C3H35_ORYSJ 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene19759 biogeco3 v1.0 307
• AutoFact: acyl-CoA binding protein 4 [Arabidopsis thaliana] sp|Q9MA55.1|ACBP4_ARATH RecName: Full=Acyl-CoA-binding domain-containing protein 4; Short=Acyl-CoA binding protein 4 gb|AAF64540.1| unknown protein [Arabidopsis thaliana] gb|AAP21266.1| At3g05420 [Arabidop 0.0
• Blast2go: acyl- binding protein 4 0.0
unknown
biog3_v1.0_unigene19813 biogeco3 v1.0 311
• AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
• Blast2go: nac domain ipr003441 0.0
unknown
biog3_v1.0_unigene19844 biogeco3 v1.0 156
• AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
• FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
• Blast2go: helix-loop-helix protein 1 a 0.0
Internal
biog3_v1.0_unigene19855 biogeco3 v1.0 363
• AutoFact: CGI-121 domain containing protein 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tp53rk-binding protein 0.0
C-terminus
biog3_v1.0_unigene19863 biogeco3 v1.0 174
• AutoFact: DNA damage-binding protein 2 [Arabidopsis thaliana] sp|Q6NQ88.1|DDB2_ARATH RecName: Full=Protein DAMAGED DNA-BINDING 2; AltName: Full=UV-damaged DNA-binding protein 2 gb|AAQ65193.1| At5g58760 [Arabidopsis thaliana] dbj|BAD42887.1| putative protein [Arabid 0.0
• Blast2go: protein damaged dna-binding 2 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain