Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene18063 biogeco3 v1.0 307
• AutoFact: Putative DnaJ protein n=1 Tax=Camellia sinensis RepID=Q2L989_CAMSI 6.0e-31
• Blast2go: heat shock protein binding protein 0.0
unknown
biog3_v1.0_unigene18101 biogeco3 v1.0 279
• AutoFact: Putative calcium homeostasis regulator n=2 Tax=Arabidopsis RepID=Q9M3C6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene18131 biogeco3 v1.0 185
• AutoFact: SPINDLY n=1 Tax=Sinningia speciosa RepID=B5AY31_9LAMI 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene18140 biogeco3 v1.0 282
• AutoFact: [R] COG0457 FOG: TPR repeat 5.0e-10
• Blast2go: protein brushy 0.0
unknown
biog3_v1.0_unigene18211 biogeco3 v1.0 306
• AutoFact: Unassigned protein
• Blast2go: enhanced downy mildew 2 0.0
unknown
biog3_v1.0_unigene18237 biogeco3 v1.0 283
• AutoFact: GC-rich sequence DNA-binding factor [Arabidopsis thaliana] dbj|BAB10004.1| unnamed protein product [Arabidopsis thaliana] dbj|BAF36503.1| transcriptional repressor ILP1 [Arabidopsis thaliana] gb|AED91319.1| GC-rich sequence DNA-binding factor [Arabidopsis 0.0
• FL-Next: tr=Gc-rich sequence DNA-binding factor, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: gc-rich sequence dna-binding factor 1-like 0.0
Internal
biog3_v1.0_unigene18238 biogeco3 v1.0 128
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb-cc type transfactor 0.0
Internal
biog3_v1.0_unigene18261 biogeco3 v1.0 312
• AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
Putative Complete
biog3_v1.0_unigene18269 biogeco3 v1.0 201
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Internal
biog3_v1.0_unigene18272 biogeco3 v1.0 362
• AutoFact: U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis thaliana] gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana] gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u11 u12 small nuclear ribonucleoprotein 35 kda protein 0.0
Putative N-terminus
biog3_v1.0_unigene18321 biogeco3 v1.0 223
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein At5g48520; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: haus augmin-like complex subunit 0.0
Internal
biog3_v1.0_unigene18332 biogeco3 v1.0 165
• AutoFact: Phosphatidylinositol-4-phosphate 5-kinase, putative n=1 Tax=Ricinus communis RepID=B9S0D1_RICCO 0.0
• FL-Next: sp=Phosphatidylinositol-4-phosphate 5-kinase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: phosphatidylinositol-4-phosphate 5-kinase 9 0.0
Internal
biog3_v1.0_unigene18357 biogeco3 v1.0 219
• AutoFact: Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana] gb|AEE30875.1| Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: interferon-related developmental regulator domain-containing protein 0.0
Coding
biog3_v1.0_unigene18360 biogeco3 v1.0 268
• AutoFact: HLH domain containing protein 4.0e-05
• Blast2go: inducer of cbf expression 1 0.0
Putative coding
biog3_v1.0_unigene18362 biogeco3 v1.0 238
• AutoFact: Phosphatidylinositol-4-phosphate 5-kinase, putative n=1 Tax=Ricinus communis RepID=B9S0D1_RICCO 0.0
• FL-Next: sp=Phosphatidylinositol-4-phosphate 5-kinase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: phosphatidylinositol-4-phosphate 5-kinase 9 0.0
Putative C-terminus
biog3_v1.0_unigene18379 biogeco3 v1.0 347
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha beta-hydrolases-like protein 2.27853e-32
Internal
biog3_v1.0_unigene18390 biogeco3 v1.0 148
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: c2-h2 zinc finger protein 0.0
Internal
biog3_v1.0_unigene18414 biogeco3 v1.0 202
• AutoFact: [BK] COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain 2.0e-16
• FL-Next: sp=Transcription factor GTE9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcription factor gte8-like 0.0
Internal
biog3_v1.0_unigene18434 biogeco3 v1.0 421
• AutoFact: MYB transcription factor MYB93 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene18452 biogeco3 v1.0 342
• AutoFact: guanyl-nucleotide exchange factor / GTPase binding / GTP binding protein [Arabidopsis thaliana] gb|AAL74193.1|AF465831_1 putative guanine nucleotide exchange factor [Arabidopsis thaliana] gb|AEE83733.1| guanyl-nucleotide exchange factor / GTPase binding / 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain