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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene17291 biogeco3 v1.0 140
AutoFact: Homeodomain-related n=1 Tax=Medicago truncatula RepID=A2Q4K0_MEDTR 2.0e-11
Blast2go: dnaj homolog subfamily c member 2-like 9.341e-16
unknown
biog3_v1.0_unigene17313 biogeco3 v1.0 259
AutoFact: GTP-binding protein [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding nuclear protein ran-3-like 0.0
Internal
biog3_v1.0_unigene17320 biogeco3 v1.0 163
AutoFact: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Arabidopsis thaliana] sp|Q8GZB6.2|SUVH4_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; AltName: Full=Histone H3-K9 methyltransferase 4; Short=H3-K9-HMTase 0.0
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh4-like 0.0
Internal
biog3_v1.0_unigene17322 biogeco3 v1.0 290
AutoFact: actin-related protein C1B [Arabidopsis thaliana] gb|AAL27513.1|AF439845_1 At2g31300/F16D14.14 [Arabidopsis thaliana] gb|AAD20675.1| putative ARP2/3 protein complex subunit p41 [Arabidopsis thaliana] gb|AAN18136.1| At2g31300/F16D14.14 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein c1a 0.0
C-terminus
biog3_v1.0_unigene17323 biogeco3 v1.0 170
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
biog3_v1.0_unigene17408 biogeco3 v1.0 230
AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR 0.0
FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase hos1-like 0.0
Internal
biog3_v1.0_unigene17418 biogeco3 v1.0 381
AutoFact: TauD domain containing protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clavaminate synthase-like protein at3g21360-like 0.0
C-terminus
biog3_v1.0_unigene17437 biogeco3 v1.0 340
AutoFact: AMP deaminase [Arabidopsis thaliana] ref|NP_850294.1| AMP deaminase [Arabidopsis thaliana] sp|O80452.2|AMPD_ARATH RecName: Full=AMP deaminase; Short=AtAMPD; AltName: Full=Protein EMBRYONIC FACTOR 1 gb|AAL07150.1| putative AMP deaminase [Arabidopsis thalia 0.0
Blast2go: amp deaminase 0.0
unknown
biog3_v1.0_unigene17444 biogeco3 v1.0 203
AutoFact: Polyketide_cyc2 domain containing protein 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl8 0.0
N-terminus
biog3_v1.0_unigene17445 biogeco3 v1.0 250
AutoFact: GTP-binding protein yptv3, putative n=1 Tax=Ricinus communis RepID=B9T5U9_RICCO 0.0
FL-Next: sp=Uncharacterized GTP-binding protein At5g64813; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized gtp-binding protein at5g64813-like 0.0
Internal
biog3_v1.0_unigene17463 biogeco3 v1.0 236
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
Blast2go: phytochrome-interacting factor 0.0
unknown
biog3_v1.0_unigene17481 biogeco3 v1.0 195
AutoFact: Zinc finger CCCH domain-containing protein 35 n=2 Tax=Oryza sativa RepID=C3H35_ORYSJ 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene17530 biogeco3 v1.0 152
AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
Blast2go: thioredoxin-like 4a 0.0
unknown
biog3_v1.0_unigene17538 biogeco3 v1.0 295
AutoFact: Auxin-responsive protein IAA7 n=1 Tax=Picea abies RepID=B2KZF8_PICAB 0.0
Blast2go: phytochrome-associated protein 1 0.0
Coding
biog3_v1.0_unigene17545 biogeco3 v1.0 265
AutoFact: BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana] gb|AEE74463.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1 brca2-containing complex subunit 3 0.0
C-terminus
biog3_v1.0_unigene17551 biogeco3 v1.0 271
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at1g67340-like 0.0
C-terminus
biog3_v1.0_unigene17582 biogeco3 v1.0 251
AutoFact: SMC-like protein [Arabidopsis thaliana] gb|AAD54770.1|AF120933_1 SMC-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Structural maintenance of chromosomes 6 smc6, putative; Ricinus communis (Castor bean). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
C-terminus
biog3_v1.0_unigene17585 biogeco3 v1.0 136
AutoFact: CBL-interacting serine/threonine-protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T407_RICCO 0.0
Blast2go: cbl-interacting serine threonine-protein 0.0
unknown
biog3_v1.0_unigene17593 biogeco3 v1.0 349
AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene17629 biogeco3 v1.0 125
AutoFact: perakine reductase [Rauvolfia serpentina] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldo keto 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain