|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene1354
|
biogeco3 v1.0
|
357
|
|
• AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR
|
0.0
|
|
• FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: dna polymerase alpha catalytic subunit
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1365
|
biogeco3 v1.0
|
427
|
|
• AutoFact: origin recognition complex subunit 4 [Zea mays] gb|AAL10455.1|AF417484_1 origin recognition complex subunit 4 [Zea mays]
|
4.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: origin recognition complex subunit 4
|
1.43104e-22
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene1368
|
biogeco3 v1.0
|
556
|
|
• AutoFact: putative transcription factor BHLH10 [Arabidopsis thaliana] gb|AAD20667.1| unknown protein [Arabidopsis thaliana]
|
4.00001e-40
|
|
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew).
|
0.0
|
|
• Blast2go: transcription factor bhlh91-like
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene1381
|
biogeco3 v1.0
|
319
|
|
• AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene1430
|
biogeco3 v1.0
|
748
|
|
• AutoFact: SGF29 tudor-like domain-containing protein [Arabidopsis thaliana] gb|AAL86293.1| unknown protein [Arabidopsis thaliana] gb|AAM67518.1| unknown protein [Arabidopsis thaliana] gb|AEE77322.1| SGF29 tudor-like domain-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: sgf29 tudor-like domain -containing protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1431
|
biogeco3 v1.0
|
518
|
|
• AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630,
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: poly polymerase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1434
|
biogeco3 v1.0
|
506
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: histone-lysine n-methyltransferase
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene1440
|
biogeco3 v1.0
|
892
|
|
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR
|
0.0
|
|
• FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: adagio protein 1
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1444
|
biogeco3 v1.0
|
375
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: unknown [Picea sitchensis]
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1461
|
biogeco3 v1.0
|
646
|
|
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group]
|
2.0e-32
|
|
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74
|
0.0
|
|
• Blast2go: transcription initiation factor iif subunit alpha
|
7.42688e-44
|
|
C-terminus
|
|
biog3_v1.0_unigene1465
|
biogeco3 v1.0
|
819
|
|
• AutoFact: smad nuclear-interacting protein 1 [Arabidopsis thaliana] sp|Q8W4D8.1|DDL_ARATH RecName: Full=FHA domain-containing protein DDL; AltName: Full=Protein DAWDLE gb|AAL32704.1| Unknown protein [Arabidopsis thaliana] gb|AAN15324.1| Unknown protein [Arabidopsis
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: fha domain-containing protein ddl
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1467
|
biogeco3 v1.0
|
333
|
|
• AutoFact: MYB transcription factor MYB93 n=2 Tax=Glycine max RepID=Q0PJJ8_SOYBN
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: myb family transcription factor
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene1521
|
biogeco3 v1.0
|
535
|
|
• AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin-protein ligase 1
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene1535
|
biogeco3 v1.0
|
301
|
|
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RJU4_RICCO
|
7.0e-08
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: conserved peptide upstream open reading frame 37
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1555
|
biogeco3 v1.0
|
437
|
|
• AutoFact: pfam07967, zf-C3HC, C3HC zinc finger-like
|
4.00001e-40
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: zinc ion binding protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1557
|
biogeco3 v1.0
|
321
|
|
• AutoFact: protein tonneau 2 [Arabidopsis thaliana] gb|AAG35778.1|AF280057_1 tonneau 2 [Arabidopsis thaliana] gb|AAG35792.1|AF290025_1 tonneau 2 [Arabidopsis thaliana] gb|AAK26026.1|AF360316_1 unknown protein [Arabidopsis thaliana] gb|AAM44936.1| unknown protein [Ar
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: phosphatase subunit g4-1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1562
|
biogeco3 v1.0
|
238
|
|
• AutoFact: abhydrolase domain-containing protein 13 [Danio rerio] sp|Q32LS6.1|ABHDD_DANRE RecName: Full=Abhydrolase domain-containing protein 13 gb|AAI09446.1| Zgc:123286 [Danio rerio]
|
2.8026e-45
|
|
• FL-Next: tr=Protein bem46, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene1569
|
biogeco3 v1.0
|
373
|
|
• AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9N8L1_POPTR
|
0.0
|
|
• Blast2go: histone-lysine n-methyltransferase ashh3-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene1583
|
biogeco3 v1.0
|
313
|
|
• AutoFact: cyclin D protein [Physcomitrella patens] emb|CAD21955.1| cyclin D [Physcomitrella patens]
|
0.0
|
|
• Blast2go: cyclin d protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene1584
|
biogeco3 v1.0
|
481
|
|
• AutoFact: WS0383.C21_J13 SS-B-23 Picea sitchensis cDNA clone WS0383_J13 3', mRNA sequence.
|
0.0
|
|
• FL-Next: sp=Nuclear cap-binding protein subunit 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: nuclear cap-binding protein
|
0.0
|
|
Internal
|
