Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene16945 biogeco3 v1.0 190
• AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
• FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
• Blast2go: helix-loop-helix protein 1 a 0.0
N-terminus
biog3_v1.0_unigene16952 biogeco3 v1.0 179
• AutoFact: putative GANP protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: leukocyte receptor cluster member-like protein 0.0
Internal
biog3_v1.0_unigene16977 biogeco3 v1.0 219
• AutoFact: PGAP1 domain containing protein 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: uncharacterized protein loc100247423 0.0
Internal
biog3_v1.0_unigene16979 biogeco3 v1.0 332
• AutoFact: splicing factor 3A subunit 3 [Arabidopsis thaliana] dbj|BAB09681.1| splicing factor 3a [Arabidopsis thaliana] gb|AAK64048.1| putative splicing factor 3a [Arabidopsis thaliana] gb|AAM44910.1| putative splicing factor 3a protein [Arabidopsis thaliana] gb|AE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 3a subunit 3-like 0.0
Internal
biog3_v1.0_unigene16991 biogeco3 v1.0 168
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• Blast2go: ccr4-associated factor 0.0
unknown
biog3_v1.0_unigene17000 biogeco3 v1.0 388
• AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 1.0e-23
• FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: zn-finger in ran binding domain-containing protein 2.94666e-23
Internal
biog3_v1.0_unigene17052 biogeco3 v1.0 179
• AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
• Blast2go: ocs element-binding 0.0
unknown
biog3_v1.0_unigene17053 biogeco3 v1.0 387
• AutoFact: cullin 4 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein cullin 4 0.0
Internal
biog3_v1.0_unigene17069 biogeco3 v1.0 277
• AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin h-1 0.0
Internal
biog3_v1.0_unigene17075 biogeco3 v1.0 199
• AutoFact: guanyl-nucleotide exchange factor / GTPase binding / GTP binding protein [Arabidopsis thaliana] gb|AAL74193.1|AF465831_1 putative guanine nucleotide exchange factor [Arabidopsis thaliana] gb|AEE83733.1| guanyl-nucleotide exchange factor / GTPase binding / 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene17078 biogeco3 v1.0 262
• AutoFact: R2R3-MYB transcription factor MYB5 n=1 Tax=Picea glauca RepID=A5JYE9_PICGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb-like protein 0.0
Internal
biog3_v1.0_unigene17122 biogeco3 v1.0 296
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: 26s proteasome regulatory subunit n2 0.0
Internal
biog3_v1.0_unigene17150 biogeco3 v1.0 227
• AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyltransferase pmt3 0.0
Internal
biog3_v1.0_unigene17169 biogeco3 v1.0 346
• AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ95_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleic acid binding 0.0
Internal
biog3_v1.0_unigene17183 biogeco3 v1.0 319
• AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
• Blast2go: vacuolar sorting protein 4b 0.0
unknown
biog3_v1.0_unigene17191 biogeco3 v1.0 221
• AutoFact: vacuolar sorting protein 9 domain-containing protein [Arabidopsis thaliana] sp|Q9LT31.1|VPS9A_ARATH RecName: Full=Vacuolar protein sorting-associated protein 9A; Short=AtVSP9a dbj|BAB01291.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76484.1| u 1.0e-09
• FL-Next: sp=Vacuolar protein sorting-associated protein 9A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: vacuolar sorting protein 9 domain-containing protein 1.43565e-21
Internal
biog3_v1.0_unigene17210 biogeco3 v1.0 360
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky dna-binding protein 21 0.0
C-terminus
biog3_v1.0_unigene17218 biogeco3 v1.0 379
• AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional adapter ada2-like 0.0
Putative N-terminus
biog3_v1.0_unigene17246 biogeco3 v1.0 257
• AutoFact: proteasome-like protein [Arabidopsis thaliana] dbj|BAC43481.1| unknown protein [Arabidopsis thaliana] gb|AEC06895.1| proteasome-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene17281 biogeco3 v1.0 211
• AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
• Blast2go: serine-type peptidase 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain