Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene5619 biogeco3 v1.0 312
AutoFact: AMP deaminase [Arabidopsis thaliana] ref|NP_850294.1| AMP deaminase [Arabidopsis thaliana] sp|O80452.2|AMPD_ARATH RecName: Full=AMP deaminase; Short=AtAMPD; AltName: Full=Protein EMBRYONIC FACTOR 1 gb|AAL07150.1| putative AMP deaminase [Arabidopsis thalia 0.0
FL-Next: sp=AMP deaminase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: amp deaminase 0.0
Internal
biog3_v1.0_unigene5638 biogeco3 v1.0 402
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integrin-linked protein kinase family protein 0.0
Internal
biog3_v1.0_unigene5651 biogeco3 v1.0 1390
AutoFact: putative Der1-like family protein [Cynodon dactylon] 0.0
FL-Next: sp=Derlin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: derlin- -like 0.0
Complete
biog3_v1.0_unigene5656 biogeco3 v1.0 423
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase ht1-like 0.0
N-terminus
biog3_v1.0_unigene5660 biogeco3 v1.0 787
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at1g67340-like 0.0
N-terminus
biog3_v1.0_unigene5662 biogeco3 v1.0 761
AutoFact: Phosphatidylinositol-4-phosphate 5-kinase, putative n=1 Tax=Ricinus communis RepID=B9S0D1_RICCO 0.0
FL-Next: sp=Phosphatidylinositol-4-phosphate 5-kinase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol-4-phosphate 5-kinase 9 0.0
Internal
biog3_v1.0_unigene5677 biogeco3 v1.0 402
AutoFact: ribosomal protein S24/S35 [Arabidopsis thaliana] ref|NP_850608.1| ribosomal protein S24/S35 [Arabidopsis thaliana] gb|AAG40012.1|AF324661_1 AT3g18240 [Arabidopsis thaliana] gb|AAG41489.1|AF326907_1 unknown protein [Arabidopsis thaliana] gb|AAK15567.1|AF34 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: ribosomal protein s24 s35 0.0
C-terminus
biog3_v1.0_unigene5678 biogeco3 v1.0 748
AutoFact: putative transcription factor BHLH10 [Arabidopsis thaliana] gb|AAD20667.1| unknown protein [Arabidopsis thaliana] 4.00001e-40
Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene5683 biogeco3 v1.0 372
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: sp=FACT complex subunit SPT16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fact complex subunit 0.0
Internal
biog3_v1.0_unigene5742 biogeco3 v1.0 849
AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAK55696.1|AF378893_1 AT5g02770/F9G14_80 [Arabidopsis thaliana] emb|CAB86031.1| putative protein [Arabidopsis thaliana] gb|AAK91488.1| AT5g02770/F9G14_80 [Arabidopsis thaliana] dbj|BAD95440.1| putative pro 4.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.05244e-12
Complete
biog3_v1.0_unigene5746 biogeco3 v1.0 383
AutoFact: WRC multi-domain protein 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene5759 biogeco3 v1.0 320
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ephedra distachya RepID=E1UHX6_EPHDI 0.0
FL-Next: tr=Putative auxin response factor 6/8; Ginkgo biloba (Ginkgo) (Maidenhair tree). 0.0
Blast2go: arf6 0.0
Internal
biog3_v1.0_unigene5782 biogeco3 v1.0 438
AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene5795 biogeco3 v1.0 367
AutoFact: HLH domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inducer of cbf expression 1 0.0
C-terminus
biog3_v1.0_unigene5810 biogeco3 v1.0 326
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: 26s proteasome regulatory subunit n2 0.0
Internal
biog3_v1.0_unigene5815 biogeco3 v1.0 1495
AutoFact: DUF2074 domain containing protein 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 2.81442e-18
Putative Complete
biog3_v1.0_unigene5829 biogeco3 v1.0 941
AutoFact: putative purple acid phosphatase precursor [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: purple acid phosphatase 0.0
C-terminus
biog3_v1.0_unigene5865 biogeco3 v1.0 1977
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-arginine methyltransferase carm1 0.0
Complete
biog3_v1.0_unigene5882 biogeco3 v1.0 1365
AutoFact: Transcription factor MYB251 n=1 Tax=Fagus crenata RepID=B5UAQ2_FAGCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tt2-like 0.0
Putative Complete
biog3_v1.0_unigene5890 biogeco3 v1.0 559
AutoFact: MYB-like transcriptional factor MBF1 n=1 Tax=Picea mariana RepID=Q40920_PICMA 0.0
FL-Next: tr=MYB-like transcriptional factor MBF1; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: myb transcription factor myb92 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain