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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene5288 biogeco3 v1.0 231
AutoFact: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Arabidopsis thaliana] sp|Q8GZB6.2|SUVH4_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; AltName: Full=Histone H3-K9 methyltransferase 4; Short=H3-K9-HMTase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh4-like 0.0
Internal
biog3_v1.0_unigene5307 biogeco3 v1.0 269
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
Blast2go: phytochrome a-associated f-box protein 0.0
Coding
biog3_v1.0_unigene5317 biogeco3 v1.0 530
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene5382 biogeco3 v1.0 527
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 5-like 0.0
Putative Complete
biog3_v1.0_unigene5387 biogeco3 v1.0 177
AutoFact: putative acid phosphatase [Lupinus luteus] 0.0
Blast2go: purple acid phosphatase 0.0
unknown
biog3_v1.0_unigene5402 biogeco3 v1.0 1116
AutoFact: RecName: Full=Ornithine carbamoyltransferase, chloroplastic; AltName: Full=Ornithine transcarbamylase; Short=OTCase; Flags: Precursor gb|AAA74997.1| ornithine carbamoyltransferase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ornithine carbamoyltransferase 0.0
C-terminus
biog3_v1.0_unigene5420 biogeco3 v1.0 180
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin related protein 0.0
Internal
biog3_v1.0_unigene5482 biogeco3 v1.0 280
AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
Blast2go: leucine-rich receptor-like protein kinase bam1 0.0
unknown
biog3_v1.0_unigene5509 biogeco3 v1.0 326
AutoFact: DNA polymerase delta p66 subunit-like n=2 Tax=Oryza sativa RepID=Q5QNL2_ORYSJ 4.0e-21
Blast2go: dna polymerase delta subunit 0.0
unknown
biog3_v1.0_unigene5514 biogeco3 v1.0 484
AutoFact: Poly [ADP-ribose] polymerase 2 [Arabidopsis thaliana] sp|Q11207.1|PARP2_ARATH RecName: Full=Poly [ADP-ribose] polymerase 2; Short=PARP-2; AltName: Full=NAD(+) ADP-ribosyltransferase 2; Short=ADPRT-2; AltName: Full=Poly[ADP-ribose] synthase 2 emb|CAA88288. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly(adp-ribose) polymerase 0.0
C-terminus
biog3_v1.0_unigene5530 biogeco3 v1.0 339
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g01970; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene5540 biogeco3 v1.0 775
AutoFact: GTP-binding protein alpha subunit, gna, putative n=1 Tax=Ricinus communis RepID=B9S8Q3_RICCO 0.0
FL-Next: sp=Guanine nucleotide-binding protein alpha-1 subunit; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: gtp-binding protein alpha 0.0
N-terminus
biog3_v1.0_unigene5556 biogeco3 v1.0 264
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
Blast2go: auxin response factor 5-like 0.0
unknown
biog3_v1.0_unigene5564 biogeco3 v1.0 292
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
Internal
biog3_v1.0_unigene5569 biogeco3 v1.0 363
AutoFact: Rab family protein 3.0e-13
FL-Next: sp=Uncharacterized GTP-binding protein At5g64813; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized gtp-binding protein at5g64813 1.74073e-19
C-terminus
biog3_v1.0_unigene5570 biogeco3 v1.0 736
AutoFact: smad nuclear-interacting protein 1 [Arabidopsis thaliana] sp|Q8W4D8.1|DDL_ARATH RecName: Full=FHA domain-containing protein DDL; AltName: Full=Protein DAWDLE gb|AAL32704.1| Unknown protein [Arabidopsis thaliana] gb|AAN15324.1| Unknown protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fha domain-containing protein ddl 0.0
Internal
biog3_v1.0_unigene5587 biogeco3 v1.0 557
AutoFact: replication factor C 38 kDa subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene5589 biogeco3 v1.0 361
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Selaginella moellendorffii RepID=D8S7A6_SELML 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene5595 biogeco3 v1.0 593
AutoFact: CBL-interacting protein kinase 03 n=2 Tax=Selaginella moellendorffii RepID=C4P7R5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene5613 biogeco3 v1.0 561
AutoFact: Cyclin-T1-4 n=2 Tax=Oryza sativa Japonica Group RepID=CCT14_ORYSJ 0.0
FL-Next: sp=Cyclin-T1-4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain