Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2948 biogeco3 v1.0 932
AutoFact: putative glycine-rich protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene2986 biogeco3 v1.0 219
AutoFact: heat shock factor binding protein [Arabidopsis thaliana] dbj|BAC43661.1| unknown protein [Arabidopsis thaliana] gb|AAO42910.1| At4g15810 [Arabidopsis thaliana] gb|AEE83654.1| heat shock factor binding protein [Arabidopsis thaliana] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock factor binding protein 0.0
N-terminus
biog3_v1.0_unigene3004 biogeco3 v1.0 433
AutoFact: phosphoprotein phosphatase inhibitor [Arabidopsis thaliana] dbj|BAA97463.1| unnamed protein product [Arabidopsis thaliana] gb|AAK91364.1| AT5g52200/F17P19_10 [Arabidopsis thaliana] gb|AAM51572.1| AT5g52200/F17P19_10 [Arabidopsis thaliana] gb|AED96182.1| p 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoprotein phosphatase inhibitor 0.0
C-terminus
biog3_v1.0_unigene3007 biogeco3 v1.0 2443
AutoFact: MAP kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen-activated protein kinase 9 0.0
Complete
biog3_v1.0_unigene3027 biogeco3 v1.0 703
AutoFact: ribosomal protein S24/S35 [Arabidopsis thaliana] ref|NP_850608.1| ribosomal protein S24/S35 [Arabidopsis thaliana] gb|AAG40012.1|AF324661_1 AT3g18240 [Arabidopsis thaliana] gb|AAG41489.1|AF326907_1 unknown protein [Arabidopsis thaliana] gb|AAK15567.1|AF34 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: ribosomal protein s24 s35 0.0
Internal
biog3_v1.0_unigene3043 biogeco3 v1.0 374
AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene3044 biogeco3 v1.0 244
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein Sb03g033240; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: rna-binding protein 5 10 0.0
Internal
biog3_v1.0_unigene3054 biogeco3 v1.0 495
AutoFact: kinesin 5 [Arabidopsis thaliana] gb|AEE82489.1| kinesin 5 [Arabidopsis thaliana] 0.0
FL-Next: sp=Kinesin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinesin-like protein 0.0
Internal
biog3_v1.0_unigene3124 biogeco3 v1.0 779
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af 38 kda subunit 0.0
Putative C-terminus
biog3_v1.0_unigene3126 biogeco3 v1.0 659
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.51258e-29
Internal
biog3_v1.0_unigene3127 biogeco3 v1.0 827
AutoFact: ADP-ribosylation factor-like A1C [Arabidopsis thaliana] gb|AAL62421.1| ADP-RIBOSYLATION FACTOR -like protein [Arabidopsis thaliana] gb|AAM48037.1| ADP-ribosylation factor-like protein [Arabidopsis thaliana] gb|AEE78600.1| ADP-ribosylation factor-like A1C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor-like protein 0.0
Complete
biog3_v1.0_unigene3131 biogeco3 v1.0 639
AutoFact: bZIP transcription factor bZIP50 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene3134 biogeco3 v1.0 435
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb-cc type transfactor 0.0
Internal
biog3_v1.0_unigene3158 biogeco3 v1.0 1035
AutoFact: Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana] gb|AEE30875.1| Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: interferon-related developmental regulator domain-containing protein 0.0
Putative Complete
biog3_v1.0_unigene3167 biogeco3 v1.0 298
AutoFact: protein tonneau 2 [Arabidopsis thaliana] gb|AAG35778.1|AF280057_1 tonneau 2 [Arabidopsis thaliana] gb|AAG35792.1|AF290025_1 tonneau 2 [Arabidopsis thaliana] gb|AAK26026.1|AF360316_1 unknown protein [Arabidopsis thaliana] gb|AAM44936.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatase subunit g4-1 0.0
C-terminus
biog3_v1.0_unigene3170 biogeco3 v1.0 575
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64110.1| unknown protein [Arabidopsis thaliana] gb|AEE754 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa49 0.0
Internal
biog3_v1.0_unigene3180 biogeco3 v1.0 602
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: haus augmin-like complex subunit 0.0
C-terminus
biog3_v1.0_unigene3204 biogeco3 v1.0 457
AutoFact: Protein phosphatase 2C-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein phosphatase 2c 10-like 0.0
C-terminus
biog3_v1.0_unigene3205 biogeco3 v1.0 858
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear protein x1 0.0
Putative C-terminus
biog3_v1.0_unigene3218 biogeco3 v1.0 416
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ap2 domain-containing transcription factor 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain