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Assembly Name: biogeco3 v1.0

Name: integral to membrane

Term: GO:0016021  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene14 biogeco3 v1.0 245
AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 0.0
Blast2go: squalene synthase 2 0.0
unknown
biog3_v1.0_unigene78 biogeco3 v1.0 392
AutoFact: auxin efflux carrier-like protein [Arabidopsis thaliana] gb|AAG51701.1|AC016972_20 hypothetical protein; 37307-38680 [Arabidopsis thaliana] gb|AAK76667.1| unknown protein [Arabidopsis thaliana] gb|AAL85106.1| unknown protein [Arabidopsis thaliana] gb|AEE3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin efflux carrier family protein 0.0
N-terminus
biog3_v1.0_unigene109 biogeco3 v1.0 204
AutoFact: CRT (chloroquine-resistance transporter)-like transporter 1 [Arabidopsis thaliana] gb|ABJ17107.1| At5g19380 [Arabidopsis thaliana] gb|AED92693.1| CRT (chloroquine-resistance transporter)-like transporter 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: crt homolog 1-like 0.0
Internal
biog3_v1.0_unigene184 biogeco3 v1.0 478
AutoFact: putative syntaxin 71 (SYP71) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: syntaxin-71 0.0
C-terminus
biog3_v1.0_unigene190 biogeco3 v1.0 553
AutoFact: Putative synaptobrevin-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane protein 714 0.0
Internal
biog3_v1.0_unigene204 biogeco3 v1.0 1229
AutoFact: transmembrane nine 1 [Arabidopsis thaliana] gb|AAL48237.1|AF446365_1 At1g10950/T19D16_13 [Arabidopsis thaliana] gb|AAK96857.1| endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] gb|AAL36263.1| putative endomembrane protein EMP70 precusor is 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily member 3-like 0.0
Internal
biog3_v1.0_unigene226 biogeco3 v1.0 241
AutoFact: ATPase [Arabidopsis thaliana] 0.0
FL-Next: sp=Phospholipid-transporting ATPase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phospholipid-transporting atpase 1-like 0.0
Internal
biog3_v1.0_unigene266 biogeco3 v1.0 295
AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9SN36_RICCO 0.0
FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: root hair defective 3 gtp-binding 0.0
Putative C-terminus
biog3_v1.0_unigene285 biogeco3 v1.0 425
AutoFact: Cl-channel clc-7 (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HV75_POPTR 0.0
FL-Next: sp=Chloride channel protein CLC-d; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloride channel protein clc-d 0.0
Internal
biog3_v1.0_unigene286 biogeco3 v1.0 728
AutoFact: Mitochondrial carrier protein [Ribes nigrum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial carrier 0.0
N-terminus
biog3_v1.0_unigene306 biogeco3 v1.0 960
AutoFact: Golgi SNARE 12 protein n=4 Tax=Arabidopsis RepID=GOS12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: golgi snare 12 protein 0.0
Complete
biog3_v1.0_unigene316 biogeco3 v1.0 455
AutoFact: DnaJ/Hsp40 cysteine-rich domain-containing protein [Arabidopsis thaliana] dbj|BAC42509.1| unknown protein [Arabidopsis thaliana] gb|AAO00738.1| unknown protein [Arabidopsis thaliana] gb|AAP21355.1| At1g75690 [Arabidopsis thaliana] gb|AEE35746.1| DnaJ/Hsp4 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene333 biogeco3 v1.0 417
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM17_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene354 biogeco3 v1.0 238
AutoFact: Amino acid transporter, putative n=1 Tax=Ricinus communis RepID=B9S1L4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amino acid permease-like protein 0.0
Internal
biog3_v1.0_unigene428 biogeco3 v1.0 1355
AutoFact: adenine nucleotide transporter 1 [Arabidopsis thaliana] gb|AAK25878.1|AF360168_1 putative carrier protein [Arabidopsis thaliana] gb|AAL06538.1|AF412085_1 AT4g01100/F2N1_16 [Arabidopsis thaliana] gb|AAB61037.1| similar to mitochondrial carrier family [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: grave disease carrier 0.0
Complete
biog3_v1.0_unigene443 biogeco3 v1.0 223
AutoFact: ADP,ATP carrier protein ER-ANT1 n=3 Tax=Arabidopsis RepID=ADT4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene639 biogeco3 v1.0 642
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 0.0
FL-Next: Isoform 2 of Chloride channel protein CLC-f OS=Arabidopsis thaliana GN=CLC-F 0.0
Blast2go: chloride channel protein clc-f-like 0.0
Internal
biog3_v1.0_unigene650 biogeco3 v1.0 398
AutoFact: Putative ammonium transporter AMT2 n=3 Tax=Cupressaceae RepID=Q0EEW6_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ammonium transporter amt2 0.0
Internal
biog3_v1.0_unigene677 biogeco3 v1.0 378
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AEE31353.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat protein kinase-like protein 0.0
Putative N-terminus
biog3_v1.0_unigene695 biogeco3 v1.0 511
AutoFact: Tetraspanin family protein [Arabidopsis thaliana] gb|AAL58930.1|AF462842_1 At2g20740/F5H14.29 [Arabidopsis thaliana] gb|AAL06877.1| At2g20740/F5H14.29 [Arabidopsis thaliana] gb|AAM19866.1| At2g20740/F5H14.29 [Arabidopsis thaliana] dbj|BAD43316.1| hypothet 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetraspanin family protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain