Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ubiquitin--protein ligase.

Term: EC:6.3.2.19  Help

Source: EC from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene18010 biogeco3 v1.0 180
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein Sb03g006120; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene18089 biogeco3 v1.0 271
• AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: brca1-associated protein 0.0
Internal
biog3_v1.0_unigene18286 biogeco3 v1.0 184
• AutoFact: Unassigned protein
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene18952 biogeco3 v1.0 246
• AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 0.0
Internal
biog3_v1.0_unigene19155 biogeco3 v1.0 287
• AutoFact: YDG_SRA multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Internal
biog3_v1.0_unigene19187 biogeco3 v1.0 208
• AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
Internal
biog3_v1.0_unigene19356 biogeco3 v1.0 483
• AutoFact: U-box domain-containing protein 44 [Arabidopsis thaliana] sp|Q9LM76.1|PUB44_ARATH RecName: Full=U-box domain-containing protein 44; AltName: Full=Plant U-box protein 44; AltName: Full=Protein SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1 gb|AAF80621.1|AC069 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.38845e-27
N-terminus
biog3_v1.0_unigene19539 biogeco3 v1.0 323
• AutoFact: Unassigned protein
• FL-Next: sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene19907 biogeco3 v1.0 324
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 8.7804e-41
Internal
biog3_v1.0_unigene19960 biogeco3 v1.0 242
• AutoFact: Ubiquitin-conjugating enzyme 1, E2 n=1 Tax=Selaginella moellendorffii RepID=D8SK34_SELML 0.0
• Blast2go: ubiquitin carrier protein 0.0
unknown
biog3_v1.0_unigene20047 biogeco3 v1.0 297
• AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
Internal
biog3_v1.0_unigene20174 biogeco3 v1.0 482
• AutoFact: E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana] sp|Q9M2S6.1|SDIR1_ARATH RecName: Full=E3 ubiquitin-protein ligase SDIR1; AltName: Full=Protein salt- and drought-induced RING finger1 gb|AAK62440.1|AF386995_1 putative protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding protein 0.0
C-terminus
biog3_v1.0_unigene20220 biogeco3 v1.0 379
• AutoFact: F-box protein ORE9 n=12 Tax=Arabidopsis RepID=ORE9_ARATH 5.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: max2 0.0
Internal
biog3_v1.0_unigene20869 biogeco3 v1.0 324
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21017 biogeco3 v1.0 276
• AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub13 0.0
Internal
biog3_v1.0_unigene21167 biogeco3 v1.0 313
• AutoFact: Protein kinase; U box n=1 Tax=Medicago truncatula RepID=Q2HTK4_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 33-like 0.0
Internal
biog3_v1.0_unigene21365 biogeco3 v1.0 250
• AutoFact: E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana] sp|Q9M2S6.1|SDIR1_ARATH RecName: Full=E3 ubiquitin-protein ligase SDIR1; AltName: Full=Protein salt- and drought-induced RING finger1 gb|AAK62440.1|AF386995_1 putative protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding protein 0.0
Internal
biog3_v1.0_unigene21750 biogeco3 v1.0 178
• AutoFact: U-box domain-containing protein 9 [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91644.1| AT3g07 5.0e-30
• Blast2go: protein 8.23859e-36
unknown
biog3_v1.0_unigene22039 biogeco3 v1.0 197
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
• Blast2go: ring u-box domain-containing protein 8.79016e-28
unknown
biog3_v1.0_unigene22224 biogeco3 v1.0 240
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
• Blast2go: ring u-box domain-containing protein 8.79016e-28
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain