Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ubiquitin--protein ligase.

Term: EC:6.3.2.19  Help

Source: EC from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene15373 biogeco3 v1.0 256
• AutoFact: F-box/leucine rich repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRD2_RICCO 0.0
• Blast2go: f-box protein ore9 0.0
unknown
biog3_v1.0_unigene15431 biogeco3 v1.0 385
• AutoFact: Protein UNUSUAL FLORAL ORGANS, putative n=1 Tax=Ricinus communis RepID=B9RE08_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box kelch-repeat protein 0.0
Internal
biog3_v1.0_unigene15464 biogeco3 v1.0 243
• AutoFact: U-box domain-containing protein 14 [Arabidopsis thaliana] sp|Q8VZ40.1|PUB14_ARATH RecName: Full=U-box domain-containing protein 14; AltName: Full=E3 ubiquitin-protein ligase PUB14; AltName: Full=Plant U-box protein 14; AltName: Full=Prototypical U-box dom 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene15576 biogeco3 v1.0 290
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RDT2_RICCO 0.0
• Blast2go: skp1-like protein 21-like 0.0
unknown
biog3_v1.0_unigene15621 biogeco3 v1.0 327
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene15952 biogeco3 v1.0 290
• AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin ligase 0.0
Putative N-terminus
biog3_v1.0_unigene15991 biogeco3 v1.0 164
• AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
• Blast2go: phytochrome a-associated f-box protein 0.0
unknown
biog3_v1.0_unigene16264 biogeco3 v1.0 249
• AutoFact: E3 ubiquitin-protein ligase CHIP [Arabidopsis thaliana] sp|Q9SRS9.1|CHIP_ARATH RecName: Full=E3 ubiquitin-protein ligase CHIP; AltName: Full=Carboxyl terminus of HSC70-interacting protein; Short=AtCHIP; AltName: Full=Plant U-box protein 61; AltName: Full= 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase chip 0.0
C-terminus
biog3_v1.0_unigene16265 biogeco3 v1.0 365
• AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: transport inhibitor response 1 0.0
Internal
biog3_v1.0_unigene16277 biogeco3 v1.0 224
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene16356 biogeco3 v1.0 321
• AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl1-like 0.0
Internal
biog3_v1.0_unigene16508 biogeco3 v1.0 270
• AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 3-like 0.0
Internal
biog3_v1.0_unigene16724 biogeco3 v1.0 318
• AutoFact: Protein UNUSUAL FLORAL ORGANS, putative n=1 Tax=Ricinus communis RepID=B9RE08_RICCO 0.0
• Blast2go: f-box kelch-repeat protein 0.0
unknown
biog3_v1.0_unigene16947 biogeco3 v1.0 223
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
Internal
biog3_v1.0_unigene16970 biogeco3 v1.0 368
• AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cullin 3 0.0
Internal
biog3_v1.0_unigene17264 biogeco3 v1.0 205
• AutoFact: zf-UBR domain containing protein 8.0e-29
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene17408 biogeco3 v1.0 230
• AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase hos1-like 0.0
Internal
biog3_v1.0_unigene17457 biogeco3 v1.0 309
• AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RC56_RICCO 0.0
• Blast2go: e3 ubiquitin-protein ligase 0.0
unknown
biog3_v1.0_unigene17779 biogeco3 v1.0 201
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RDT2_RICCO 0.0
• FL-Next: sp=SKP1-like protein 21; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: skp1-like protein 21-like 0.0
Internal
biog3_v1.0_unigene17791 biogeco3 v1.0 223
• AutoFact: YDG_SRA multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain