|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene2402
|
biogeco3 v1.0
|
233
|
|
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO
|
9.94922e-44
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u-box domain-containing protein 30-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene2520
|
biogeco3 v1.0
|
495
|
|
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO
|
0.0
|
|
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase ubr4
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene2523
|
biogeco3 v1.0
|
466
|
|
• AutoFact: E3 ubiquitin-protein ligase UPL7 [Arabidopsis thaliana] ref|NP_001030850.1| E3 ubiquitin-protein ligase UPL7 [Arabidopsis thaliana] sp|Q9SCQ2.1|UPL7_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL7; Short=Ubiquitin-protein ligase 7 emb|CAB64212.1| put
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase upl7
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene2602
|
biogeco3 v1.0
|
1735
|
|
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA
|
0.0
|
|
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine).
|
0.0
|
|
• Blast2go: f-box family protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene2661
|
biogeco3 v1.0
|
289
|
|
• AutoFact: Ubiquitin; TRAF-like [Medicago truncatula]
|
4.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene3337
|
biogeco3 v1.0
|
578
|
|
• AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2
|
9.0e-28
|
|
• FL-Next: tr=Brca1-associated protein, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: brca1-associated protein
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene3485
|
biogeco3 v1.0
|
479
|
|
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO
|
0.0
|
|
• FL-Next: Isoform 2 of U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3532
|
biogeco3 v1.0
|
416
|
|
• AutoFact: HECT; Ubiquitin [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase upl5
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3633
|
biogeco3 v1.0
|
407
|
|
• AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase hos1-like
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene3794
|
biogeco3 v1.0
|
456
|
|
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO
|
0.0
|
|
• FL-Next: sp=U-box domain-containing protein 30; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: u-box domain-containing protein 30-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3954
|
biogeco3 v1.0
|
1113
|
|
• AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RC56_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene3983
|
biogeco3 v1.0
|
544
|
|
• AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=F-box/LRR-repeat protein 15; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4004
|
biogeco3 v1.0
|
1987
|
|
• AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin-protein pub59
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene4893
|
biogeco3 v1.0
|
337
|
|
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: ubiquitin-protein ligase 1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5109
|
biogeco3 v1.0
|
364
|
|
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin protein ligase RIN2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5307
|
biogeco3 v1.0
|
269
|
|
• AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO
|
0.0
|
|
• Blast2go: phytochrome a-associated f-box protein
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene5357
|
biogeco3 v1.0
|
639
|
|
• AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin-protein pub13
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene5937
|
biogeco3 v1.0
|
788
|
|
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB36_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase sis3-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5989
|
biogeco3 v1.0
|
1166
|
|
• AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
|
0.0
|
|
• Blast2go: ubiquitin-protein ligase ubr7
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene6071
|
biogeco3 v1.0
|
1259
|
|
• AutoFact: Probable ubiquitin-conjugating enzyme E2 n=3 Tax=Picea RepID=O65079_PICMA
|
0.0
|
|
• FL-Next: tr=Probable ubiquitin-conjugating enzyme E2; Picea mariana (Black spruce) (Abies mariana).
|
0.0
|
|
• Blast2go: ubiquitin-conjugating enzyme e2
|
0.0
|
|
Complete
|
