Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene6342 biogeco3 v1.0 458
AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRM7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah-phd domain-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene6345 biogeco3 v1.0 1202
AutoFact: DUF3598 domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6347 biogeco3 v1.0 1174
AutoFact: phantastica-like MYB protein [Eschscholzia californica subsp. californica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asymmetric leaves1 and rough 0.0
N-terminus
biog3_v1.0_unigene6359 biogeco3 v1.0 511
AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
unknown
biog3_v1.0_unigene6381 biogeco3 v1.0 573
AutoFact: protein ULTRAPETALA 1 [Arabidopsis thaliana] sp|Q8GZA8.1|ULT1_ARATH RecName: Full=Protein ULTRAPETALA 1 dbj|BAC41785.1| unknown protein [Arabidopsis thaliana] gb|ABH04520.1| At4g28190 [Arabidopsis thaliana] gb|AEE85451.1| protein ULTRAPETALA 1 [Arabidopsi 0.0
FL-Next: sp=Protein ULTRAPETALA 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ultrapetala 1 0.0
C-terminus
biog3_v1.0_unigene6453 biogeco3 v1.0 402
AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene6635 biogeco3 v1.0 686
AutoFact: BAH and TFIIS domain-containing protein n=4 Tax=Arabidopsis RepID=F4JCS8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah and tfiis domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene6652 biogeco3 v1.0 665
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6748 biogeco3 v1.0 718
AutoFact: SEUSS transcriptional co-regulator [Arabidopsis thaliana] ref|NP_001117434.1| SEUSS transcriptional co-regulator [Arabidopsis thaliana] sp|Q8W234.1|SEUSS_ARATH RecName: Full=Transcriptional corepressor SEUSS gb|AAL57277.1| SEUSS transcriptional co-regulat 0.0
FL-Next: sp=Transcriptional corepressor SEUSS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor seuss-like 0.0
Internal
biog3_v1.0_unigene6755 biogeco3 v1.0 287
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
Blast2go: at4g04770 t4b21_16 0.0
unknown
biog3_v1.0_unigene6772 biogeco3 v1.0 455
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
Blast2go: myb family transcription factor 0.0
unknown
biog3_v1.0_unigene6786 biogeco3 v1.0 392
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
Blast2go: myb family transcription factor 0.0
unknown
biog3_v1.0_unigene6807 biogeco3 v1.0 2041
AutoFact: putative replication licensing factor MCM4 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna replication licensing factor mcm4 0.0
C-terminus
biog3_v1.0_unigene6809 biogeco3 v1.0 714
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
Complete
biog3_v1.0_unigene6821 biogeco3 v1.0 495
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
Blast2go: nac domain ipr003441 0.0
unknown
biog3_v1.0_unigene6885 biogeco3 v1.0 408
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 0.0
Internal
biog3_v1.0_unigene6891 biogeco3 v1.0 1009
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase i 0.0
Internal
biog3_v1.0_unigene6900 biogeco3 v1.0 339
AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene6917 biogeco3 v1.0 375
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
unknown
biog3_v1.0_unigene6937 biogeco3 v1.0 276
AutoFact: DUF1421 multi-domain protein 9.0e-18
Blast2go: zinc finger protein 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain