Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene5025 biogeco3 v1.0 452
• AutoFact: Putative microtubule-associated protein, identical [Solanum demissum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 65-kda microtubule-associated protein 3-like 0.0
Internal
biog3_v1.0_unigene5090 biogeco3 v1.0 450
• AutoFact: ap endonuclease, putative (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] 6.0e-12
• FL-Next: sp=Apurinic endonuclease-redox protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: apurinic endonuclease-redox protein 1.67927e-16
Internal
biog3_v1.0_unigene5155 biogeco3 v1.0 518
• AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
• Blast2go: methyl-binding domain protein 0.0
unknown
biog3_v1.0_unigene5168 biogeco3 v1.0 537
• AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional adapter ada2-like 0.0
Internal
biog3_v1.0_unigene5169 biogeco3 v1.0 356
• AutoFact: R2R3-MYB transcription factor MYB11 [Picea glauca] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene5174 biogeco3 v1.0 834
• AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
• Blast2go: bel1 homeotic 0.0
unknown
biog3_v1.0_unigene5199 biogeco3 v1.0 671
• AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SUQ2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: global transcription factor group 0.0
N-terminus
biog3_v1.0_unigene5290 biogeco3 v1.0 466
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: endoribonuclease dicer 0.0
Putative C-terminus
biog3_v1.0_unigene5310 biogeco3 v1.0 373
• AutoFact: heat shock factor protein hsf8-related [Glycine max] 0.0
• Blast2go: heat shock transcription factor 1 0.0
unknown
biog3_v1.0_unigene5317 biogeco3 v1.0 530
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
• Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene5387 biogeco3 v1.0 177
• AutoFact: putative acid phosphatase [Lupinus luteus] 0.0
• Blast2go: purple acid phosphatase 0.0
unknown
biog3_v1.0_unigene5399 biogeco3 v1.0 326
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• Blast2go: dna helicase ino80-like 0.0
unknown
biog3_v1.0_unigene5402 biogeco3 v1.0 1116
• AutoFact: RecName: Full=Ornithine carbamoyltransferase, chloroplastic; AltName: Full=Ornithine transcarbamylase; Short=OTCase; Flags: Precursor gb|AAA74997.1| ornithine carbamoyltransferase [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ornithine carbamoyltransferase 0.0
C-terminus
biog3_v1.0_unigene5426 biogeco3 v1.0 520
• AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 2.8026e-45
Complete
biog3_v1.0_unigene5480 biogeco3 v1.0 437
• AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
• FL-Next: sp=BEL1-like homeodomain protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: bel1 homeotic 0.0
Internal
biog3_v1.0_unigene5512 biogeco3 v1.0 550
• AutoFact: yippee-like protein [Arabidopsis thaliana] gb|AAM62838.1| Yippee-like protein [Arabidopsis thaliana] gb|AAN71946.1| unknown protein [Arabidopsis thaliana] dbj|BAH20057.1| AT2G40110 [Arabidopsis thaliana] gb|AEC09780.1| yippee-like protein [Arabidopsis tha 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene5514 biogeco3 v1.0 484
• AutoFact: Poly [ADP-ribose] polymerase 2 [Arabidopsis thaliana] sp|Q11207.1|PARP2_ARATH RecName: Full=Poly [ADP-ribose] polymerase 2; Short=PARP-2; AltName: Full=NAD(+) ADP-ribosyltransferase 2; Short=ADPRT-2; AltName: Full=Poly[ADP-ribose] synthase 2 emb|CAA88288. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly(adp-ribose) polymerase 0.0
C-terminus
biog3_v1.0_unigene5530 biogeco3 v1.0 339
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g01970; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene5564 biogeco3 v1.0 292
• AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
• FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dna polymerase alpha catalytic 0.0
Internal
biog3_v1.0_unigene5587 biogeco3 v1.0 557
• AutoFact: replication factor C 38 kDa subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain