Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene25438 biogeco3 v1.0 238
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: sp=Auxin response factor 17; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
biog3_v1.0_unigene25502 biogeco3 v1.0 242
AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
Blast2go: bel1 homeotic 0.0
Coding
biog3_v1.0_unigene25503 biogeco3 v1.0 393
AutoFact: histone-lysine N-methyltransferase CLF [Arabidopsis thaliana] sp|P93831.2|CLF_ARATH RecName: Full=Histone-lysine N-methyltransferase CLF; AltName: Full=Polycomb group protein CURLY LEAF; AltName: Full=Protein INCURVATA 1; AltName: Full=Protein SET DOMAIN 0.0
FL-Next: sp=Histone-lysine N-methyltransferase CLF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polycomb protein ez1 0.0
Internal
biog3_v1.0_unigene25507 biogeco3 v1.0 127
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
Blast2go: ap2 domain containing protein 2.25605e-23
unknown
biog3_v1.0_unigene25710 biogeco3 v1.0 507
AutoFact: Milkweed pod1 n=1 Tax=Zea mays RepID=B5LZ60_MAIZE 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rolled leaf 9 0.0
C-terminus
biog3_v1.0_unigene25747 biogeco3 v1.0 483
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
C-terminus
biog3_v1.0_unigene25843 biogeco3 v1.0 350
AutoFact: ABC transporter 1-like protein [Rhodiola fastigiata] 6.0e-15
FL-Next: sp=ABC transporter F family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter family protein 6.90493e-17
Putative N-terminus
biog3_v1.0_unigene25990 biogeco3 v1.0 226
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 9.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.93918e-30
N-terminus
biog3_v1.0_unigene26293 biogeco3 v1.0 272
AutoFact: Caprin-1_C multi-domain protein 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger protein 1.05389e-34
C-terminus
biog3_v1.0_unigene26351 biogeco3 v1.0 191
AutoFact: transcription factor DcMYB5 [Daucus carota] 0.0
FL-Next: tr=MYB-like protein; Taxus globosa. 0.0
Blast2go: transcription factor tt2-like 0.0
Internal
biog3_v1.0_unigene26453 biogeco3 v1.0 249
AutoFact: DUF3755 domain containing protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene26537 biogeco3 v1.0 248
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain