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Assembly Name: biogeco3 v1.0

Name: protein ubiquitination

Term: GO:0016567  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene23543 biogeco3 v1.0 206
AutoFact: E3 ubiquitin-protein ligase HOS1 [Arabidopsis thaliana] sp|Q84JU6.1|HOS1_ARATH RecName: Full=E3 ubiquitin-protein ligase HOS1; AltName: Full=Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1; AltName: Full=RING finger protein HOS1 gb|AAO42259.1| un 6.0e-38
Blast2go: e3 ubiquitin-protein ligase hos1-like 0.0
unknown
biog3_v1.0_unigene23736 biogeco3 v1.0 313
AutoFact: amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] sp|P42744.1|ULA1_ARATH RecName: Full=NEDD8-activating enzyme E1 regulatory subunit; AltName: Full=Auxin-resistance protein AXR1 gb|AAB59348.1| ubiquitin-activating enzyme E1 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nedd8-activating enzyme e1 regulatory subunit 0.0
Putative N-terminus
biog3_v1.0_unigene23974 biogeco3 v1.0 320
AutoFact: KAP multi-domain protein 6.0e-08
Blast2go: u-box domain-containing protein 4-like 0.0
unknown
biog3_v1.0_unigene24370 biogeco3 v1.0 260
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRQ3_RICCO 0.0
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24526 biogeco3 v1.0 411
AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub13 0.0
N-terminus
biog3_v1.0_unigene24775 biogeco3 v1.0 175
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9Q7_PICSI 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
unknown
biog3_v1.0_unigene25222 biogeco3 v1.0 215
AutoFact: Protein kinase; U box n=1 Tax=Medicago truncatula RepID=Q2HTK4_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u-box domain-containing protein 33-like 0.0
N-terminus
biog3_v1.0_unigene25302 biogeco3 v1.0 142
AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
Blast2go: ring-box protein 0.0
unknown
biog3_v1.0_unigene26101 biogeco3 v1.0 107
AutoFact: Probable ubiquitin-conjugating enzyme E2 n=3 Tax=Picea RepID=O65079_PICMA 0.0
FL-Next: tr=Probable ubiquitin-conjugating enzyme E2; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
Internal
biog3_v1.0_unigene26252 biogeco3 v1.0 301
AutoFact: Ubiquitin carrier protein n=1 Tax=Populus trichocarpa RepID=B9HDK6_POPTR 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme 2.49431e-43
Putative N-terminus
biog3_v1.0_unigene26277 biogeco3 v1.0 289
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain