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Assembly Name: biogeco3 v1.0

Name: embryo development ending in seed dormancy

Term: GO:0009793  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2 biogeco3 v1.0 574
AutoFact: elongation factor like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Putative C-terminus
biog3_v1.0_unigene81 biogeco3 v1.0 1337
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
C-terminus
biog3_v1.0_unigene84 biogeco3 v1.0 215
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
biog3_v1.0_unigene90 biogeco3 v1.0 567
AutoFact: RecName: Full=Putative N6-adenosine-methyltransferase MT-A70-like gb|ABD28511.1| MT-A70 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n6-adenosine-methyltransferase mt-a70-like protein 0.0
Internal
biog3_v1.0_unigene296 biogeco3 v1.0 306
AutoFact: maternal effect embryo arrest 12 protein [Arabidopsis thaliana] gb|AAU44442.1| hypothetical protein AT2G02955 [Arabidopsis thaliana] gb|AEC05644.1| maternal effect embryo arrest 12 protein [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: maternal effect embryo arrest 12 protein 1.81476e-35
Internal
biog3_v1.0_unigene347 biogeco3 v1.0 283
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus
biog3_v1.0_unigene361 biogeco3 v1.0 269
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0
Blast2go: flowering time control protein fy 0.0
unknown
biog3_v1.0_unigene414 biogeco3 v1.0 871
AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete
biog3_v1.0_unigene479 biogeco3 v1.0 698
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
Internal
biog3_v1.0_unigene524 biogeco3 v1.0 733
AutoFact: putative FtsH protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent metalloprotease 0.0
C-terminus
biog3_v1.0_unigene707 biogeco3 v1.0 677
AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
Blast2go: transcription factor tcp4 4.49701e-39
Putative coding
biog3_v1.0_unigene730 biogeco3 v1.0 367
AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; subsp. trichocarpa). 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
biog3_v1.0_unigene804 biogeco3 v1.0 409
AutoFact: rRNA-processing protein UTP23, putative n=1 Tax=Ricinus communis RepID=B9SW27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrna-processing protein utp23 homolog 0.0
N-terminus
biog3_v1.0_unigene926 biogeco3 v1.0 962
AutoFact: Vacuolar sorting protein 39 [Arabidopsis thaliana] gb|AAM20730.1| unknown protein [Arabidopsis thaliana] gb|AEE86679.1| Vacuolar sorting protein 39 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vam6 vps39-like 0.0
Internal
biog3_v1.0_unigene1026 biogeco3 v1.0 779
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dehydroquinate dehydratase shikimate dehydrogenase 0.0
N-terminus
biog3_v1.0_unigene1119 biogeco3 v1.0 1142
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: dna topoisomerase 1 1.4013e-45
N-terminus
biog3_v1.0_unigene1157 biogeco3 v1.0 974
AutoFact: Mitochondrial Rho GTPase n=2 Tax=Selaginella moellendorffii RepID=D8RQC7_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene1167 biogeco3 v1.0 630
AutoFact: cell division protein FtsH-like [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FtsH; Cyanidium caldarium. Plastid; Chloroplast. 0.0
Blast2go: cell division protein 0.0
C-terminus
biog3_v1.0_unigene1235 biogeco3 v1.0 689
AutoFact: splicing factor 3B subunit 4 [Arabidopsis thaliana] gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana] gb|AEC06776.1| splicing factor 3B subunit 4 [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 3b subunit 4-like 0.0
Putative C-terminus
biog3_v1.0_unigene1363 biogeco3 v1.0 466
AutoFact: embryo defective 1381 protein [Arabidopsis thaliana] gb|AEC08529.1| embryo defective 1381 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: embryo defective 1381 protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain