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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene66 biogeco3 v1.0 1700
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AAD24639.1| putative receptor-like protein kinase [Arabidopsis thaliana] gb|ACN59305.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEC09269.1| leucin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at1g68400-like 0.0
N-terminus
biog3_v1.0_unigene81 biogeco3 v1.0 1337
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
C-terminus
biog3_v1.0_unigene90 biogeco3 v1.0 567
AutoFact: RecName: Full=Putative N6-adenosine-methyltransferase MT-A70-like gb|ABD28511.1| MT-A70 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n6-adenosine-methyltransferase mt-a70-like protein 0.0
Internal
biog3_v1.0_unigene96 biogeco3 v1.0 370
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Internal
biog3_v1.0_unigene103 biogeco3 v1.0 412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene104 biogeco3 v1.0 159
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S925_RICCO 0.0
Blast2go: probable s-acyltransferase at1g69420-like 0.0
unknown
biog3_v1.0_unigene143 biogeco3 v1.0 799
AutoFact: Protein binding protein n=3 Tax=Andropogoneae RepID=B6SPB5_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
Putative C-terminus
biog3_v1.0_unigene162 biogeco3 v1.0 178
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain containing protein 2.25605e-23
Internal
biog3_v1.0_unigene186 biogeco3 v1.0 370
AutoFact: puative protein [Arabidopsis thaliana] emb|CAB79800.1| puative protein [Arabidopsis thaliana] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene199 biogeco3 v1.0 280
AutoFact: Protein ABIL1, putative n=1 Tax=Ricinus communis RepID=B9RDZ9_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein abil1 0.0
Internal
biog3_v1.0_unigene201 biogeco3 v1.0 519
AutoFact: replication licensing factor MCM7 homologue [Zea mays] emb|CAC44902.1| replication licensing factor MCM7 homologue [Zea mays] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein prolifera 0.0
N-terminus
biog3_v1.0_unigene212 biogeco3 v1.0 1152
AutoFact: Ubiquitin-conjugating enzyme E2 35 n=42 Tax=Embryophyta RepID=UBC35_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene217 biogeco3 v1.0 730
AutoFact: Cell division cycle protein 14 (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I465_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: cdc14b protein 0.0
Putative C-terminus
biog3_v1.0_unigene224 biogeco3 v1.0 392
AutoFact: Ninja-family protein AFP3 n=1 Tax=Arabidopsis thaliana RepID=AFP3_ARATH 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ninja-family protein afp3 3.08565e-15
Putative Complete
biog3_v1.0_unigene235 biogeco3 v1.0 496
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 5 0.0
Complete
biog3_v1.0_unigene261 biogeco3 v1.0 363
AutoFact: thylakoid rhodanese-like protein [Arabidopsis thaliana] sp|Q9M158.2|Y4105_ARATH RecName: Full=Uncharacterized protein At4g01050, chloroplastic; Flags: Precursor gb|AAL09804.1| AT4g01050/F2N1_31 [Arabidopsis thaliana] gb|AAL15331.1| AT4g01050/F2N1_31 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01050 f2n1_31 0.0
Putative C-terminus
biog3_v1.0_unigene267 biogeco3 v1.0 278
AutoFact: Pkinase domain containing protein 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: obp3-responsive protein 1 0.0
Putative N-terminus
biog3_v1.0_unigene273 biogeco3 v1.0 390
AutoFact: Calcineurin B-like protein 03 n=12 Tax=Magnoliophyta RepID=A5AHA7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin b-like protein 3 0.0
Putative C-terminus
biog3_v1.0_unigene284 biogeco3 v1.0 489
AutoFact: SNARE-interacting protein KEULE n=2 Tax=Arabidopsis RepID=KEULE_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snare-interacting protein keule 0.0
Putative N-terminus
biog3_v1.0_unigene312 biogeco3 v1.0 275
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain