Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2183 biogeco3 v1.0 733
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 5 0.0
C-terminus
biog3_v1.0_unigene2198 biogeco3 v1.0 236
AutoFact: Alpha-L-fucosidase 1 n=3 Tax=Andropogoneae RepID=B6UDD6_MAIZE 0.0
Blast2go: alpha-l-fucosidase 1 0.0
unknown
biog3_v1.0_unigene2259 biogeco3 v1.0 499
AutoFact: BTB/POZ domain-containing protein KCTD9, putative n=1 Tax=Ricinus communis RepID=B9SI86_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel tetramerisation and pentapeptide repeat-containing protein 0.0
N-terminus
biog3_v1.0_unigene2265 biogeco3 v1.0 509
AutoFact: WS03730.C21_E19 SS-B-N-22 Picea sitchensis cDNA clone WS03730_E19 3', mRNA sequence. 0.0
FL-Next: sp=Uncharacterized protein At3g06530; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u3 small nucleolar rna-associated protein 10 and nuc211 domain-containing protein 0.0
Internal
biog3_v1.0_unigene2267 biogeco3 v1.0 419
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase BSL1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: serine threonine protein phosphatase 0.0
Internal
biog3_v1.0_unigene2302 biogeco3 v1.0 321
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 0.0
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna ligase 0.0
Internal
biog3_v1.0_unigene2311 biogeco3 v1.0 280
AutoFact: ABI1 protein phosphatase 2C-like protein (Fragment) n=3 Tax=Pinus RepID=Q5FYN4_PINTA 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abi1 protein phosphatase 2c-like protein 0.0
Internal
biog3_v1.0_unigene2327 biogeco3 v1.0 1297
AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene2354 biogeco3 v1.0 742
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
C-terminus
biog3_v1.0_unigene2383 biogeco3 v1.0 922
AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene2391 biogeco3 v1.0 3211
AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=B8LLU8_PICSI 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 3 0.0
Complete
biog3_v1.0_unigene2415 biogeco3 v1.0 281
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
N-terminus
biog3_v1.0_unigene2420 biogeco3 v1.0 692
AutoFact: putative COP9 complex subunit 6 [Oryza sativa Japonica Group] emb|CAJ81251.1| COP9 signalosome subunit 6 [Oryza sativa] dbj|BAG86632.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE68946.1| hypothetical protein OsJ_27828 [Oryza sativa Japon 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cop9 signalosome complex subunit 6a 0.0
N-terminus
biog3_v1.0_unigene2437 biogeco3 v1.0 227
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene2463 biogeco3 v1.0 356
AutoFact: protein TWIN LOV 1 [Arabidopsis thaliana] dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana] 0.0
Blast2go: protein twin lov 1 0.0
unknown
biog3_v1.0_unigene2497 biogeco3 v1.0 1221
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
N-terminus
biog3_v1.0_unigene2504 biogeco3 v1.0 572
AutoFact: Calcium dependent protein kinase 14 n=2 Tax=Populus trichocarpa RepID=B9GEZ7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-dependent protein 0.0
C-terminus
biog3_v1.0_unigene2525 biogeco3 v1.0 674
AutoFact: Transcription factor BTF3 homolog (Fragment) n=2 Tax=Picea RepID=O65073_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Complete
biog3_v1.0_unigene2535 biogeco3 v1.0 2111
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
C-terminus
biog3_v1.0_unigene2576 biogeco3 v1.0 1068
AutoFact: acyl-CoA binding protein 4 [Arabidopsis thaliana] sp|Q9MA55.1|ACBP4_ARATH RecName: Full=Acyl-CoA-binding domain-containing protein 4; Short=Acyl-CoA binding protein 4 gb|AAF64540.1| unknown protein [Arabidopsis thaliana] gb|AAP21266.1| At3g05420 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl- binding protein 4 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain