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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene26258 biogeco3 v1.0 229
AutoFact: pfam05955, Herpes_gp2, Equine herpesvirus glycoprotein gp2 6.0e-09
Blast2go: hydroxyproline-rich glycoprotein family protein 0.0
Coding
biog3_v1.0_unigene26260 biogeco3 v1.0 289
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
Internal
biog3_v1.0_unigene26277 biogeco3 v1.0 289
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
C-terminus
biog3_v1.0_unigene26287 biogeco3 v1.0 452
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pathogenesis-related homeodomain protein 7.47012e-18
Putative N-terminus
biog3_v1.0_unigene26325 biogeco3 v1.0 207
AutoFact: MADS-box transcription factor n=6 Tax=Triticeae RepID=A4UXS0_WHEAT 1.0e-20
Blast2go: mads-box transcription factor 0.0
unknown
biog3_v1.0_unigene26332 biogeco3 v1.0 164
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
N-terminus
biog3_v1.0_unigene26343 biogeco3 v1.0 319
AutoFact: MAC/Perforin domain-containing protein [Arabidopsis thaliana] gb|AAG51760.1|AC068667_39 unknown protein; 124288-121737 [Arabidopsis thaliana] gb|AAL75908.1| At1g29690/F15D2_24 [Arabidopsis thaliana] gb|ABO38750.1| At1g29690 [Arabidopsis thaliana] gb|AEE31 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene26357 biogeco3 v1.0 197
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Internal
biog3_v1.0_unigene26376 biogeco3 v1.0 225
AutoFact: CONSTANS interacting protein 2a n=1 Tax=Solanum lycopersicum RepID=Q2VY18_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-binding transcription 0.0
Internal
biog3_v1.0_unigene26419 biogeco3 v1.0 338
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
Internal
biog3_v1.0_unigene26427 biogeco3 v1.0 356
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear pore complex protein nup205-like 0.0
Internal
biog3_v1.0_unigene26448 biogeco3 v1.0 269
AutoFact: CBL-interacting protein kinase 09 n=2 Tax=Vitis vinifera RepID=A5BZV3_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbl-interacting serine threonine-protein 0.0
Internal
biog3_v1.0_unigene26500 biogeco3 v1.0 378
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
C-terminus
biog3_v1.0_unigene26526 biogeco3 v1.0 213
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene26549 biogeco3 v1.0 196
AutoFact: Calcineurin B-like protein 03 n=12 Tax=Magnoliophyta RepID=A5AHA7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin b-like protein 3 0.0
Putative N-terminus
biog3_v1.0_unigene26565 biogeco3 v1.0 750
AutoFact: MAP kinase n=1 Tax=Selaginella moellendorffii RepID=D8SYB3_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen-activated protein kinase kinase 6 0.0
N-terminus
biog3_v1.0_unigene26594 biogeco3 v1.0 473
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
Putative Complete
biog3_v1.0_unigene26648 biogeco3 v1.0 890
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase afc1 1.28089e-25
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain