Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene25871 biogeco3 v1.0 332
• AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
• Blast2go: phytochrome a-associated f-box protein 0.0
Putative coding
biog3_v1.0_unigene25930 biogeco3 v1.0 364
• AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h3 0.0
C-terminus
biog3_v1.0_unigene25980 biogeco3 v1.0 475
• AutoFact: Response to dessication RD2 n=1 Tax=Jatropha curcas RepID=D6BR58_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adenine nucleotide alpha hydrolases-like protein 0.0
C-terminus
biog3_v1.0_unigene26031 biogeco3 v1.0 281
• AutoFact: PREG-like protein (Fragment) n=1 Tax=Picea mariana RepID=O65065_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene26038 biogeco3 v1.0 309
• AutoFact: Kinesin-like protein NACK1 n=1 Tax=Nicotiana tabacum RepID=Q8S950_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kinesin-like protein 0.0
Internal
biog3_v1.0_unigene26040 biogeco3 v1.0 201
• AutoFact: Alpha-glucan water dikinase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPI3_RICCO 0.0
• FL-Next: sp=Alpha-glucan water dikinase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: glucan water dikinase 0.0
Internal
biog3_v1.0_unigene26042 biogeco3 v1.0 272
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RUJ6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 0.0
Internal
biog3_v1.0_unigene26062 biogeco3 v1.0 220
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
• Blast2go: cytosolic glutamine synthetase 0.0
unknown
biog3_v1.0_unigene26079 biogeco3 v1.0 396
• AutoFact: vesicle-associated membrane protein 722 [Arabidopsis thaliana] sp|P47192.2|VA722_ARATH RecName: Full=Vesicle-associated membrane protein 722; Short=AtVAMP722; AltName: Full=Synaptobrevin-related protein 1 gb|AAL31896.1|AF419564_1 At2g33120/F25I18.14 [Arab 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vesicle-associated membrane synaptobrevin 7b 0.0
N-terminus
biog3_v1.0_unigene26117 biogeco3 v1.0 301
• AutoFact: Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCK2_RICCO 0.0
• Blast2go: calcium-dependent protein kinase 0.0
unknown
biog3_v1.0_unigene26127 biogeco3 v1.0 203
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
N-terminus
biog3_v1.0_unigene26128 biogeco3 v1.0 233
• AutoFact: ATP-dependent zinc metalloprotease FTSH 5, chloroplastic n=4 Tax=Arabidopsis RepID=FTSH5_ARATH 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast protease 9.01679e-32
Internal
biog3_v1.0_unigene26157 biogeco3 v1.0 191
• AutoFact: PK12 protein kinase [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene26158 biogeco3 v1.0 289
• AutoFact: CBL-interacting protein kinase 16 n=2 Tax=Vitis vinifera RepID=C4P7W5_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
Internal
biog3_v1.0_unigene26173 biogeco3 v1.0 209
• AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene26178 biogeco3 v1.0 341
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta chain 0.0
Putative C-terminus
biog3_v1.0_unigene26182 biogeco3 v1.0 279
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
• FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: coatomer alpha 0.0
Internal
biog3_v1.0_unigene26210 biogeco3 v1.0 368
• AutoFact: histone H4 [Hyacinthus orientalis] 6.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene26233 biogeco3 v1.0 366
• AutoFact: Paramyosin, putative n=1 Tax=Ricinus communis RepID=B9R7C9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene26241 biogeco3 v1.0 282
• AutoFact: CONSTANS interacting protein 2a n=1 Tax=Solanum lycopersicum RepID=Q2VY18_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccaat-binding transcription 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain