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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene24995 biogeco3 v1.0 424
AutoFact: Putative receptor kinase n=1 Tax=Malus x domestica RepID=Q2LJM2_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
Putative N-terminus
biog3_v1.0_unigene25047 biogeco3 v1.0 158
AutoFact: Ubiquitin-conjugating enzyme E2 variant 1C n=3 Tax=Eukaryota RepID=D3PJZ2_9MAXI 0.0
Blast2go: ubiquitin-conjugating enzyme spm2 0.0
unknown
biog3_v1.0_unigene25102 biogeco3 v1.0 161
AutoFact: Serine/threonine-protein kinase AFC2 n=4 Tax=Arabidopsis RepID=AFC2_ARATH 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
biog3_v1.0_unigene25129 biogeco3 v1.0 63
AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 2.0e-40
Blast2go: ubiquitin-like protein smt3 0.0
unknown
biog3_v1.0_unigene25133 biogeco3 v1.0 137
AutoFact: UPF0497 membrane protein 2 n=1 Tax=Picea sitchensis RepID=U4972_PICSI 2.0e-34
Blast2go: salicylic acid-induced fragment 1 protein 0.0
unknown
biog3_v1.0_unigene25154 biogeco3 v1.0 265
AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisome biogenesis factor 10-like 0.0
Internal
biog3_v1.0_unigene25159 biogeco3 v1.0 284
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
Blast2go: at1g14850-like protein 0.0
unknown
biog3_v1.0_unigene25161 biogeco3 v1.0 109
AutoFact: peroxin 22 [Arabidopsis thaliana] sp|Q9LSX7.1|PEX22_ARATH RecName: Full=Peroxisome biogenesis protein 22; AltName: Full=Peroxin-22; Short=AtPEX22 dbj|BAB02849.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36317.1| unknown protein [Arabidopsis th 0.0
Blast2go: peroxisome biogenesis protein 22-like 0.0
unknown
biog3_v1.0_unigene25166 biogeco3 v1.0 241
AutoFact: CDC27 domain containing protein 4.0e-06
Blast2go: dna-binding protein bin4 0.0
unknown
biog3_v1.0_unigene25226 biogeco3 v1.0 247
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
C-terminus
biog3_v1.0_unigene25302 biogeco3 v1.0 142
AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
Blast2go: ring-box protein 0.0
unknown
biog3_v1.0_unigene25306 biogeco3 v1.0 262
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Internal
biog3_v1.0_unigene25343 biogeco3 v1.0 203
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
Blast2go: f-box family protein 0.0
unknown
biog3_v1.0_unigene25370 biogeco3 v1.0 291
AutoFact: guanine nucleotide-exchange-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: brefeldin a-inhibited guanine nucleotide-exchange protein 1-like 0.0
Putative C-terminus
biog3_v1.0_unigene25398 biogeco3 v1.0 261
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
FL-Next: sp=Kinesin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene25451 biogeco3 v1.0 160
AutoFact: Caltractin n=1 Tax=Atriplex nummularia RepID=CATR_ATRNU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caltractin 0.0
N-terminus
biog3_v1.0_unigene25454 biogeco3 v1.0 430
AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
Internal
biog3_v1.0_unigene25462 biogeco3 v1.0 186
AutoFact: protein defective in meristem silencing 3 [Arabidopsis thaliana] gb|AAK83630.1| AT3g49250/F2K15_110 [Arabidopsis thaliana] gb|AAL90947.1| AT3g49250/F2K15_110 [Arabidopsis thaliana] gb|AEE78515.1| protein defective in meristem silencing 3 [Arabidopsis thal 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene25500 biogeco3 v1.0 505
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene25507 biogeco3 v1.0 127
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
Blast2go: ap2 domain containing protein 2.25605e-23
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain